The first European woolly rhinoceros mitogenomes, retrieved from cave hyena coprolites, suggest long-term phylogeographic differentiation.

Autor: Seeber PA; Limnological Institute, University of Konstanz, Konstanz, Germany., Palmer Z; Limnological Institute, University of Konstanz, Konstanz, Germany., Schmidt A; Limnological Institute, University of Konstanz, Konstanz, Germany., Chagas A; Limnological Institute, University of Konstanz, Konstanz, Germany., Kitagawa K; Senckenberg Centre for Human Evolution and Palaeoenvironment, University of Tübingen, Tubingen, Germany.; Institute of Archaeological Sciences, Department of Geosciences, University of Tübingen, Tubingen, Germany., Marinova-Wolff E; Laboratory for Archaeobotany Baden-Württemberg, State Office for Cultural Heritage, Gaienhofen-Hemmenhofen, Germany., Tafelmaier Y; State Office for Cultural Heritage Baden-Württemberg, Palaeolithic & Mesolithic Research Unit, Gaienhofen-Hemmenhofen, Germany., Epp LS; Limnological Institute, University of Konstanz, Konstanz, Germany.
Jazyk: angličtina
Zdroj: Biology letters [Biol Lett] 2023 Nov; Vol. 19 (11), pp. 20230343. Date of Electronic Publication: 2023 Nov 01.
DOI: 10.1098/rsbl.2023.0343
Abstrakt: The woolly rhinoceros ( Coelodonta antiquitatis ) is an iconic species of the Eurasian Pleistocene megafauna, which was abundant in Eurasia in the Pleistocene until its demise beginning approximately 10 000 years ago. Despite the early recovery of several specimens from well-known European archaeological sites, including its type specimen (Blumenbach 1799), no genomes of European populations were available so far, and all available genomic data originated exclusively from Siberian populations. Using coprolites of cave hyenas ( Crocuta crocuta spelea ) recovered from Middle Palaeolithic layers of two caves in Germany (Bockstein-Loch and Hohlenstein-Stadel), we isolated and enriched predator and prey DNA to assemble the first European woolly rhinoceros mitogenomes, in addition to cave hyena mitogenomes. Both coprolite samples produced copious sequences assigned to C. crocuta (27% and 59% mitogenome coverage, respectively) and woolly rhinoceros ( Coelodonta antiquitatis ; 27% and 81% coverage, respectively). The sequences suggested considerable DNA degradation, which may limit the conclusions to be drawn; however, the mitogenomes of European woolly rhinoceros are genetically distinct from the Siberian woolly rhinoceros, and analyses of the more complete mitogenome suggest a split of the populations potentially coinciding with the earliest fossil records of woolly rhinoceros in Europe.
Databáze: MEDLINE