Genome of the epiphytic bacterium Achromobacter denitrificans strain EPI24, isolated from a macroalga located in the Colombian Caribbean.
| Autor: | Niño Corredor AN; Group of Bioprocesses and Bioprospecting, Biotechnology Institute, Universidad Nacional de Colombia, Bogotá, Colombia., Comba González NB; Group of Bioprocesses and Bioprospecting, Biotechnology Institute, Universidad Nacional de Colombia, Bogotá, Colombia., Acelas M; Macromolecules Research Group, Chemistry Department, Universidad Nacional de Colombia, Bogotá, Colombia., Montoya Castaño D; Group of Bioprocesses and Bioprospecting, Biotechnology Institute, Universidad Nacional de Colombia, Bogotá, Colombia. |
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| Jazyk: | angličtina |
| Zdroj: | Biotechnology reports (Amsterdam, Netherlands) [Biotechnol Rep (Amst)] 2023 Feb 22; Vol. 37, pp. e00788. Date of Electronic Publication: 2023 Feb 22 (Print Publication: 2023). |
| DOI: | 10.1016/j.btre.2023.e00788 |
| Abstrakt: | Marine macroalgae are being recognized as reservoirs of biologically active compounds, as their surfaces are susceptible to the colonization of microorganisms which can produce enzymes with a wide range of molecular architectures. Among these bacteria, Achromobacter is responsible for the biosynthesis of laccases. In this research, we performed a bioinformatic pipeline to annotate the sequenced complete genome of the epiphytic bacterium Achromobacter denitrificans strain EPI24, from the macroalgal surface of the Ulva lactuca species; this strain showed laccase activity which has been previously assessed on plate assays. The genome of A. denitrificans strain EPI24 has a size of ∼6.95 Mb, a GC content of 67.33%, and 6,603 protein-coding genes. The functional annotation of the A. denitrificans strain EPI24 genome confirmed the presence of genes encoding for laccases, which could have functional properties of interest in processes such as the biodegradation of phenolic compounds under versatile and efficient conditions. Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. (© 2023 The Authors. Published by Elsevier B.V.) |
| Databáze: | MEDLINE |
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