Draft Genomes Sequences of 11 Geodermatophilaceae Strains Isolated from Building Stones from New England and Indian Stone Ruins found at historic sites in Tamil Nadu, India.

Autor:	Ennis NJ; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; Present address: Seres Therapeutics, Cambridge, MA, USA., Dharumadurai D; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; Departments of Microbiology, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India., Sevigny JL; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; Hubbard Center for Genome Studies, University of New Hampshire, Durham, New Hampshire, USA., Wilmot R; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA., Alnaimat SM; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; Present address: Department of Medical Analysis, Al-Hussein Bin Talal University, Ma'an, Jordan., Bryce JG; Department of Earth Sciences, University of New Hampshire, Durham, NH, USA., Thomas WK; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; Hubbard Center for Genome Studies, University of New Hampshire, Durham, New Hampshire, USA., Tisa LS; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
Jazyk:	angličtina
Zdroj:	Journal of genomics [J Genomics] 2022 Sep 21; Vol. 10, pp. 69-77. Date of Electronic Publication: 2022 Sep 21 (Print Publication: 2022).
DOI:	10.7150/jgen.76121
Abstrakt:	Metagenomic analysis of stone microbiome from samples collected in New England, USA and Tamil Nadu, India identified numerous Actinobacteria including Geodermatphilaceae . A culture-dependent approach was performed as a companion study with this culture-independent metagenomic analysis of these stone samples and resulted in the isolation of eleven Geodermatphilaceae strains (2 Geodermatophilus and 9 Blastococcus strains). The genomes of the 11 Geodermatphilaceae strains were sequenced and analyzed. The genomes for the two Geodermatophilus isolates, DF1-2 and TF2-6, were 4.45 and 4.75 Mb, respectively, while the Blastococcus genomes ranged in size from 3.98 to 5.48 Mb. Phylogenetic analysis, digital DNA:DNA hybridization (dDDH), and comparisons of the average nucleotide identities (ANI) suggest the isolates represent novel Geodermatophilus and Blastococcus species. Functional analysis of the Geodermatphilaceae genomes provides insight on the stone microbiome niche. Competing Interests: Competing Interests: The authors have declared that no competing interest exists. (© The author(s).)
Databáze:	MEDLINE
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