POInT: A Tool for Modeling Ancient Polyploidies Using Multiple Polyploid Genomes.
| Autor: | Hao Y; Biodesign Center for Mechanisms of Evolution, Arizona State University, Tempe, AZ, USA., Conant GC; Bioinformatics Research Center, North Carolina State University, Raleigh, NC, USA. gconant@ncsu.edu.; Program in Genetics, North Carolina State University, Raleigh, NC, USA. gconant@ncsu.edu.; Department of Biological Sciences, North Carolina State University, Raleigh, NC, USA. gconant@ncsu.edu. |
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| Jazyk: | angličtina |
| Zdroj: | Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2022; Vol. 2512, pp. 81-91. |
| DOI: | 10.1007/978-1-0716-2429-6_6 |
| Abstrakt: | Ancient polyploidy events are widely distributed across the evolutionary history of eukaryotes. Here, we describe a likelihood-based tool, POInT (the Polyploidy Orthology Inference Tool), for modeling ancient whole genome duplications and triplications, assigning homoeologous genes to subgenomes and inferring gene losses across different parental subgenomes after polyploidy. (© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.) |
| Databáze: | MEDLINE |
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