Evolutionary analysis of buffalo sterol regulatory element-binding factor (SREBF) family genes and their affection on milk traits.

Autor: Ye T; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Yuan J; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Raza SHA; State Key Laboratory of Animal Genetics Breeding and Reproduction, College of Animal Science and Technology, Northwest A&F University, Yangling, China., Deng T; Guangxi Provincial Key Laboratory of Buffalo Genetics, Breeding and Reproduction Technology, Buffalo Research Institute, Chinese Academy of Agricultural Sciences, Nanning, China., Yang L; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Ahmad MJ; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Hosseini SM; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Zhang X; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Alamoudi MO; Department of Biology, College of Science, University of Hail, Hail, Saudi Arabia., AlGabbani Q; Department of Biology, College of Sciences and Humanities, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia., Alghamdi YS; Department of Biology, Turabah University College, Taif University, Taif, Saudi Arabia., Chen C; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Liang A; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China., Schreurs NM; Animal Science, School of Agriculture and Environment, Massey University, Palmerston North, New Zealand., Yang L; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Ministry of Education, Huazhong Agricultural University, Wuhan, China.
Jazyk: angličtina
Zdroj: Animal biotechnology [Anim Biotechnol] 2023 Dec; Vol. 34 (7), pp. 2082-2093. Date of Electronic Publication: 2022 May 09.
DOI: 10.1080/10495398.2022.2070185
Abstrakt: The sterol regulatory element-binding factor (SREBF) genes are a vital group of proteins binding to the sterol regulatory element 1 ( SRE-1 ) regulating the synthesis of fatty acid. Two potential candidate genes ( SREBF1 and SREBF2 ) have been identified as affecting milk traits. This study aims to identify the SREBF family of genes and find candidate markers or SREBF genes influencing lactation production in buffalo. A genome-wide study was performed and identified seven SREBF genes randomly distributed on 7 chromosomes and 24 protein isoforms in buffalos. The SREBF family of genes were also characterized in cattle, goat, sheep and horse, and using these all-protein sequences, a phylogenetic tree was built. The SREBF family genes were homologous between each other in the five livestock. Eight single nucleotide polymorphisms (SNPs) within or near the SREBF genes in the buffalo genome were identified and at least one milk production trait was associated with three of the SNP. The expression of SREBF genes at different lactation stages in buffalo and cattle from published data were compared and the SREBF genes retained a high expression throughout lactation with the trend being the same for buffalo and cattle. These results provide valuable information for clarifying the evolutionary relationship of the SREBF family genes and determining the role of SREBF genes in the regulation of milk production in buffalo.
Databáze: MEDLINE
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