Nematode genome announcement: The draft genome sequence of entomopathogenic nematode Heterorhabditis indica .

Autor:	Bhat CG; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi 110012, Delhi, India., Somvanshi VS; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi 110012, Delhi, India., Budhwar R; Bionivid Technology Private Limited, 209, 4th Cross Rd, B Channasandra, Kasturi Nagar, Bengaluru 560043, Karnataka, India., Godwin J; Bionivid Technology Private Limited, 209, 4th Cross Rd, B Channasandra, Kasturi Nagar, Bengaluru 560043, Karnataka, India., Rao U; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi 110012, Delhi, India.
Jazyk:	angličtina
Zdroj:	Journal of nematology [J Nematol] 2022 Jan 21; Vol. 53. Date of Electronic Publication: 2022 Jan 21 (Print Publication: 2021).
DOI:	10.21307/jofnem-2021-101
Abstrakt:	Heterorhabditis indica is one of the most widely used entomopathogenic nematodes for the biological control of agricultural insect pests worldwide. The draft genome of H. indica was sequenced using three genomic libraries of 300 bp, 600 bp and 5 kb sizes by Illumina HiSeq platform. The size of the draft genome assembly was 91.26 Mb, comprising 3,538 scaffolds. Genome completeness analysis by BUSCO (Benchmarking Universal Single-Copy Orthologs) showed 84% complete, and 6.5% fragmented BUSCOs. Further, 10,494 protein-coding genes were predicted. The H. indica draft genome will enable comparative and functional genomic studies in Heterorhabditis nematodes. (© 2021 Authors.)
Databáze:	MEDLINE
Externí odkaz:	Zobrazit plný text záznamu