Complete genome sequence of cnidium virus 1, a novel betanucleorhabdovirus infecting Cnidium officinale.

Autor: Belete MT; Biosystem and Bioengineering Program, University of Science and Technology (UST), Daejeon, 34141, Republic of Korea.; Plant System Engineering Research Center, Korean Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.; Plant Biotechnology Research Division, Amhara Agricultural Research Institute, Bahir Dar, Ethiopia., Igori D; Plant System Engineering Research Center, Korean Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.; Department of Biology, School of Mathematics and Natural Sciences, Mongolian National University of Education, Ulaanbaatar, Mongolia., Kim SE; Plant System Engineering Research Center, Korean Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea., Lee SH; School of Applied Bioscience, College of Agriculture and Life Sciences, Kyungpook National University, Daegu, 98411, Republic of Korea. suheon@knu.ac.kr., Moon JS; Biosystem and Bioengineering Program, University of Science and Technology (UST), Daejeon, 34141, Republic of Korea. jsmoon@kribb.re.k.; Plant System Engineering Research Center, Korean Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea. jsmoon@kribb.re.k.
Jazyk: angličtina
Zdroj: Archives of virology [Arch Virol] 2022 Mar; Vol. 167 (3), pp. 973-977. Date of Electronic Publication: 2022 Feb 03.
DOI: 10.1007/s00705-021-05348-9
Abstrakt: The complete genomic sequence of a plant rhabdovirus that was identified in Cnidium officinale in Yeongyang-dun, South Korea, is reported here. The virus, tentatively named "cnidium virus 1" (CnV1), has a negative-sense RNA genome of ~ 14 kb, and its organization most closely resembles that of unsegmented plant rhabdoviruses, containing six antisense open reading frames (ORFs) in the order 3'-N-P-P3-M-G-L-5'. Intergenic regions containing conserved sequences separate the genes. The genome of CnV1 is 37.8-56% identical in its complete nucleotide sequence to betanucleorhabdoviruses and other related rhabdoviruses. Therefore, based on the sequence similarity criteria for species demarcation, its genome organization, and its phylogenetic position, CnV1 should be classified as a new member of the genus Betanucleorhabdovirus in the family Rhabdoviridae. CnV1 is the first rhabdovirus found in C. officinale.
(© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
Databáze: MEDLINE
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