In silico reconstitution of DNA replication. Lessons from single-molecule imaging and cryo-tomography applied to single-particle cryo-EM.

Autor: Greiwe JF; Macromolecular Machines Laboratory, The Francis Crick Institute, London NW1 1AT, UK., Zanetti G; Institute of Structural and Molecular Biology, Birkbeck College, Malet St., London WC1E 7HX, UK., Miller TCR; Macromolecular Machines Laboratory, The Francis Crick Institute, London NW1 1AT, UK; Center for Chromosome Stability, Department of Cellular and Molecular Medicine, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen N, Denmark. Electronic address: thomas.miller@crick.ac.uk., Costa A; Macromolecular Machines Laboratory, The Francis Crick Institute, London NW1 1AT, UK. Electronic address: alessandro.costa@crick.ac.uk.
Jazyk: angličtina
Zdroj: Current opinion in structural biology [Curr Opin Struct Biol] 2022 Feb; Vol. 72, pp. 279-286. Date of Electronic Publication: 2022 Jan 10.
DOI: 10.1016/j.sbi.2021.11.015
Abstrakt: DNA replication has been reconstituted in vitro with yeast proteins, and the minimal system requires the coordinated assembly of 16 distinct replication factors, consisting of 42 polypeptides. To understand the molecular interplay between these factors at the single residue level, new structural biology tools are being developed. Inspired by advances in single-molecule fluorescence imaging and cryo-tomography, novel single-particle cryo-EM experiments have been used to characterise the structural mechanism for the loading of the replicative helicase. Here, we discuss how in silico reconstitution of single-particle cryo-EM data can help describe dynamic systems that are difficult to approach with conventional three-dimensional classification tools.
Competing Interests: Conflict of interest statement Nothing declared.
(Copyright © 2022 The Authors. Published by Elsevier Ltd.. All rights reserved.)
Databáze: MEDLINE
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