The UCSC Genome Browser database: 2022 update.

Autor: Lee BT; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Barber GP; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Benet-Pagès A; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.; Medical Genetics Center (Medizinisch Genetisches Zentrum), Munich 80335, Germany., Casper J; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Clawson H; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Diekhans M; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Fischer C; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Gonzalez JN; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Hinrichs AS; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Lee CM; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Muthuraman P; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Nassar LR; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Nguy B; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Pereira T; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Perez G; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Raney BJ; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Rosenbloom KR; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Schmelter D; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Speir ML; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Wick BD; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Zweig AS; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Haussler D; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Kuhn RM; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Haeussler M; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Kent WJ; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Jazyk: angličtina
Zdroj: Nucleic acids research [Nucleic Acids Res] 2022 Jan 07; Vol. 50 (D1), pp. D1115-D1122.
DOI: 10.1093/nar/gkab959
Abstrakt: The UCSC Genome Browser, https://genome.ucsc.edu, is a graphical viewer for exploring genome annotations. The website provides integrated tools for visualizing, comparing, analyzing, and sharing both publicly available and user-generated genomic datasets. Data highlights this year include a collection of easily accessible public hub assemblies on new organisms, now featuring BLAT alignment and PCR capabilities, and new and updated clinical tracks (gnomAD, DECIPHER, CADD, REVEL). We introduced a new Track Sets feature and enhanced variant displays to aid in the interpretation of clinical data. We also added a tool to rapidly place new SARS-CoV-2 genomes in a global phylogenetic tree enabling researchers to view the context of emerging mutations in our SARS-CoV-2 Genome Browser. Other new software focuses on usability features, including more informative mouseover displays and new fonts.
(© The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research.)
Databáze: MEDLINE