A novel and sensitive real-time PCR system for universal detection of poxviruses.

Autor: Luciani L; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France. lea.luciani@hotmail.fr., Inchauste L; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France., Ferraris O; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France.; Centre National de Référence-Laboratoire Expert Orthopoxvirus, Institut de Recherche Biomédicale Des Armées (IRBA), 91220, Brétigny-sur-Orge, France., Charrel R; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France., Nougairède A; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France., Piorkowski G; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France., Peyrefitte C; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France.; Centre National de Référence-Laboratoire Expert Orthopoxvirus, Institut de Recherche Biomédicale Des Armées (IRBA), 91220, Brétigny-sur-Orge, France., Bertagnoli S; IHAP, Université de Toulouse, INRAE, ENVT, Toulouse, France., de Lamballerie X; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France., Priet S; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), Marseille, France.
Jazyk: angličtina
Zdroj: Scientific reports [Sci Rep] 2021 Jan 19; Vol. 11 (1), pp. 1798. Date of Electronic Publication: 2021 Jan 19.
DOI: 10.1038/s41598-021-81376-4
Abstrakt: Success in smallpox eradication was enabled by the absence of non-human reservoir for smallpox virus. However, other poxviruses with a wider host spectrum can infect humans and represent a potential health threat to humans, highlighted by a progressively increasing number of infections by (re)emerging poxviruses, requiring new improved diagnostic and epidemiological tools. We describe here a real-time PCR assay targeting a highly conserved region of the poxvirus genome, thus allowing a pan-Poxvirus detection (Chordopoxvirinae and Entomopoxvirinae). This system is specific (99.8% for vertebrate samples and 99.7% for arthropods samples), sensitive (100% for vertebrate samples and 86.3% for arthropods samples) and presents low limit of detection (< 1000 DNA copies/reaction). In addition, this system could be also valuable for virus discovery and epidemiological projects.
Databáze: MEDLINE
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