Microbiomics and cloud-based analytics advance sustainable soil management.

Autor: Das AJ; Department of Biotechnology, School of Applied Sciences, REVA University, Rukmini Knowledge Park, Bangalore-560064, Karnataka, India., Ravinath R; Department of Biotechnology, School of Applied Sciences, REVA University, Rukmini Knowledge Park, Bangalore-560064, Karnataka, India., Shilpa BR; Department of Biotechnology, School of Applied Sciences, REVA University, Rukmini Knowledge Park, Bangalore-560064, Karnataka, India., Rohith BS; Molsys Scientific (Molsys Pvt. Ltd) Yelahanka, Bangalore, Karnataka, India., Goyal AK; Department of Biotechnology, Bodoland University, Kokrajhar- 783370, Assam, India., Shilpa NR; Department of Biotechnology, Bodoland University, Kokrajhar- 783370, Assam, India., Prasannakumar MK; Department of Plant Pathology, University of Agricultural Sciences, Bengaluru- 560065, India., Prasannakumar HE; Department of Plant Pathology, University of Agricultural Sciences, Bengaluru- 560065, India., Ekambaram H; Department of Biotechnology, Maharani Lakshmi Ammani College for Women, Bengaluru-560012, Karnataka, India., Usha T; Department of Biochemistry, Maharani Lakshmi Ammani College for Women, Bengaluru-560012, Karnataka, India., Middha SK; Department of Biotechnology, Maharani Lakshmi Ammani College for Women, Bengaluru-560012, Karnataka, India, drsushilmiddha@gmail.com.
Jazyk: angličtina
Zdroj: Frontiers in bioscience (Landmark edition) [Front Biosci (Landmark Ed)] 2021 Jan 01; Vol. 26 (3), pp. 478-495. Date of Electronic Publication: 2021 Jan 01.
DOI: 10.2741/4903
Abstrakt: Soil constitutes a major component of the agro-ecosystem. Unrestrained uses of chemical pesticides and increased human activities have contributed to unprecedented changes in soil microflora affecting productivity. Modern microbiomics has proven to be an indispensable tool to understand the adaptations underlying complex soil microbial communities and their beneficial applications. In this review, we seek to emphasize the scope of microbiomics in enhancing soil productivity by providing an overview of the various sequencing platforms considering key parameters such as the accuracy, read lengths, reads per run, time involved and weighing out their pros and cons. The advances in modern ultra-high-throughput microbiomics platforms in combination with cloud-based analytics for in-depth exploration of soil-microbe associations can help achieve sustainable soil management contributing to better plant yield and productivity.
Databáze: MEDLINE