Data on draft genome sequence of stenotrophomonas sp. SAM-B isolated from a mineral cold spring located in Tyva, southern Siberia.

Autor: Kashkak ES; The Department of Chemistry, Tuvan State University, 36 Lenin St., Kyzyl 667000, Russian Federation., Kataev VY; Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, 11 Pionerskaya St., Orenburg 460000, Russian Federation., Khlopko YA; Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, 11 Pionerskaya St., Orenburg 460000, Russian Federation., Budagaeva VG; Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 6 Sakhyanovoy St., Ulan-Ude 670047, Russian Federation., Danilova EV; Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 6 Sakhyanovoy St., Ulan-Ude 670047, Russian Federation., Oorzhak US; The Department of Chemistry, Tuvan State University, 36 Lenin St., Kyzyl 667000, Russian Federation., Dagurova OP; Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 6 Sakhyanovoy St., Ulan-Ude 670047, Russian Federation., Plotnikov AO; Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, 11 Pionerskaya St., Orenburg 460000, Russian Federation.
Jazyk: angličtina
Zdroj: Data in brief [Data Brief] 2020 Sep 04; Vol. 32, pp. 106278. Date of Electronic Publication: 2020 Sep 04 (Print Publication: 2020).
DOI: 10.1016/j.dib.2020.106278
Abstrakt: Stenotrophomonas sp. SAM-B was isolated from Uzharlyg Mineral Cold Spring, Samagaltay Settlement, Republic of Tyva (Southern Siberia), Russian Federation. A whole genome sequencing of Stenotrophomonas sp. SAM-B was performed using an Illumina MiSeq platform. The resulting draft genome contains 4,253,956 bp with 66.48% GC-content and 71 contigs; the longest contig contains 968,648 bp, and the N 50 has a length of 401,736 bp. The genome includes 3816 protein-coding genes, among which 23 are responsible for protein degradation, 65 are associated with stress response, and 31 are associated with virulence, disease, and defense, including beta-lactamase and resistance to fluoroquinolones. The genome data on the SAM-B strain provides fundamental knowledge that would allow a better understanding of the microorganisms inhabiting cold water environments. Moreover, the results of the genome annotation indicated that diverse metabolic pathways are encoded in the genome of the SAM-B strain and that it has biotechnological potential. The draft genome sequence of Stenotrophomonas sp. SAM-B has been deposited in DDBJ/ENA/GenBank under the accession number JABBXB000000000; the accession number of the genome sequence referred to in this paper is JABBXB010000000.
Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
(© 2020 The Authors. Published by Elsevier Inc.)
Databáze: MEDLINE
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