Corynebacterium glutamicum CrtR and Its Orthologs in Actinobacteria : Conserved Function and Application as Genetically Encoded Biosensor for Detection of Geranylgeranyl Pyrophosphate.

Autor: Henke NA; Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany., Austermeier S; Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany.; Department of Microbial Pathogenicity Mechanisms, Leibniz Institute for Natural Product Research and Infection Biology (HKI), 07745 Jena, Germany., Grothaus IL; Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany.; Faculty of Production Engineering, Bremen University, 28359 Bremen, Germany., Götker S; Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany., Persicke M; Faculty of CeBiTec, Bielefeld University, 33615 Bielefeld, Germany., Peters-Wendisch P; Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany., Wendisch VF; Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany.
Jazyk: angličtina
Zdroj: International journal of molecular sciences [Int J Mol Sci] 2020 Jul 31; Vol. 21 (15). Date of Electronic Publication: 2020 Jul 31.
DOI: 10.3390/ijms21155482
Abstrakt: Carotenoid biosynthesis in Corynebacterium glutamicum is controlled by the MarR-type regulator CrtR, which represses transcription of the promoter of the crt operon (P crtE ) and of its own gene (P crtR ). Geranylgeranyl pyrophosphate (GGPP), and to a lesser extent other isoprenoid pyrophosphates, interfere with the binding of CrtR to its target DNA in vitro, suggesting they act as inducers of carotenoid biosynthesis. CrtR homologs are encoded in the genomes of many other actinobacteria. In order to determine if and to what extent the function of CrtR, as a metabolite-dependent transcriptional repressor of carotenoid biosynthesis genes responding to GGPP, is conserved among actinobacteria , five CrtR orthologs were characterized in more detail. EMSA assays showed that the CrtR orthologs from Corynebacterium callunae , Acidipropionibacterium jensenii , Paenarthrobacter nicotinovorans , Micrococcus luteus and Pseudarthrobacter chlorophenolicus bound to the intergenic region between their own gene and the divergently oriented gene, and that GGPP inhibited these interactions. In turn, the CrtR protein from C. glutamicum bound to DNA regions upstream of the orthologous crtR genes that contained a 15 bp DNA sequence motif conserved between the tested bacteria. Moreover, the CrtR orthologs functioned in C. glutamicum in vivo at least partially, as they complemented the defects in the pigmentation and expression of a P crtE _ gfp uv transcriptional fusion that were observed in a crtR deletion mutant to varying degrees. Subsequently, the utility of the P crtE _ gfp uv transcriptional fusion and chromosomally encoded CrtR from C. glutamicum as genetically encoded biosensor for GGPP was studied. Combined FACS and LC-MS analysis demonstrated a correlation between the sensor fluorescent signal and the intracellular GGPP concentration, and allowed us to monitor intracellular GGPP concentrations during growth and differentiate between strains engineered to accumulate GGPP at different concentrations.
Databáze: MEDLINE
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