Dataset for the combined transcriptome assembly of M. oleifera and functional annotation.

Autor:	Shafi KM; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India.; The University of Trans-Disciplinary Health Sciences & Technology (TDU), Yelahanka, Bangalore 560064, Karnataka, India., Joshi AG; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Meenakshi I; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Pasha SN; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Harini K; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Mahita J; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Sajeevan RS; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Karpe SD; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Ghosh P; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Nitish S; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India.; The University of Trans-Disciplinary Health Sciences & Technology (TDU), Yelahanka, Bangalore 560064, Karnataka, India., Gandhimathi A; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Mathew OK; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Prasanna SH; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Malini M; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Mutt E; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Naika M; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Ravooru N; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Rao RM; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Shingate PN; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Sukhwal A; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Sunitha MS; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Upadhyay AK; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India.; Department of Biotechnology, Thapar Institute of Engineering and Technology, Patiala, Punjab 147004, India., Vinekar RS; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India., Sowdhamini R; National Centre for Biological Sciences (TIFR), GKVK Campus, Bangalore 560065, Karnataka, India.
Jazyk:	angličtina
Zdroj:	Data in brief [Data Brief] 2020 Mar 20; Vol. 30, pp. 105416. Date of Electronic Publication: 2020 Mar 20 (Print Publication: 2020).
DOI:	10.1016/j.dib.2020.105416
Abstrakt:	In this paper, we present the data acquired during transcriptome analysis of the plant Moringa oleifera [1] from five different tissues (root, stem, leaf, flower and seed) by RNA sequencing. A total of 271 million reads were assembled with an N50 of 2094 bp. The combined transcriptome was assessed for transcript abundance across five tissues. The protein coding genes identified from the transcripts were annotated and used for orthology analysis. Further, enzymes involved in the biosynthesis of select medicinally important secondary metabolites, vitamins and ion transporters were identified and their expression levels across tissues were examined. The data generated by RNA sequencing has been deposited to NCBI public repository under the accession number PRJNA394193 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA394193). Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. (© 2020 The Author(s).)
Databáze:	MEDLINE
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