The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history.
Autor: | Filiault DL; Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria., Ballerini ES; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, United States., Mandáková T; Central-European Institute of Technology, Masaryk University, Brno, Czech Republic., Aköz G; Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.; Vienna Graduate School of Population Genetics, Vienna, Austria., Derieg NJ; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, United States., Schmutz J; Department of Energy, Joint Genome Institute, Walnut Creek, United States.; HudsonAlpha Institute of Biotechnology, Alabama, United States., Jenkins J; Department of Energy, Joint Genome Institute, Walnut Creek, United States.; HudsonAlpha Institute of Biotechnology, Alabama, United States., Grimwood J; Department of Energy, Joint Genome Institute, Walnut Creek, United States.; HudsonAlpha Institute of Biotechnology, Alabama, United States., Shu S; Department of Energy, Joint Genome Institute, Walnut Creek, United States., Hayes RD; Department of Energy, Joint Genome Institute, Walnut Creek, United States., Hellsten U; Department of Energy, Joint Genome Institute, Walnut Creek, United States., Barry K; Department of Energy, Joint Genome Institute, Walnut Creek, United States., Yan J; Department of Energy, Joint Genome Institute, Walnut Creek, United States., Mihaltcheva S; Department of Energy, Joint Genome Institute, Walnut Creek, United States., Karafiátová M; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Olomouc, Czech Republic., Nizhynska V; Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria., Kramer EM; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, United States., Lysak MA; Central-European Institute of Technology, Masaryk University, Brno, Czech Republic., Hodges SA; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, United States., Nordborg M; Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria. |
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Jazyk: | angličtina |
Zdroj: | ELife [Elife] 2018 Oct 16; Vol. 7. Date of Electronic Publication: 2018 Oct 16. |
DOI: | 10.7554/eLife.36426 |
Abstrakt: | The columbine genus Aquilegia is a classic example of an adaptive radiation, involving a wide variety of pollinators and habitats. Here we present the genome assembly of A. coerulea 'Goldsmith', complemented by high-coverage sequencing data from 10 wild species covering the world-wide distribution. Our analyses reveal extensive allele sharing among species and demonstrate that introgression and selection played a role in the Aquilegia radiation. We also present the remarkable discovery that the evolutionary history of an entire chromosome differs from that of the rest of the genome - a phenomenon that we do not fully understand, but which highlights the need to consider chromosomes in an evolutionary context. Competing Interests: DF, EB, TM, GA, ND, JS, JJ, JG, SS, RH, UH, KB, JY, SM, MK, VN, EK, ML, SH No competing interests declared, MN Reviewing editor, eLife (© 2018, Filiault et al.) |
Databáze: | MEDLINE |
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