Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data.

Autor: Alaux M; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France. michael.alaux@inra.fr., Rogers J; International Wheat Genome Sequencing Consortium (IWGSC), 18 High Street, Little Eversden, Cambridge, CB23 1HE, UK., Letellier T; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Flores R; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Alfama F; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Pommier C; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Mohellibi N; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Durand S; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Kimmel E; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Michotey C; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Guerche C; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Loaec M; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Lainé M; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Steinbach D; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France.; Present address: GQE-Le Moulon UMR 320, INRA, Université Paris-Sud, Université Paris-Saclay, CNRS, AgroParisTech, Ferme du Moulon, 91190, Gif-sur-Yvette, France., Choulet F; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France., Rimbert H; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France., Leroy P; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France., Guilhot N; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France., Salse J; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France., Feuillet C; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.; Present address: Inari Agriculture, 200 Sydney Street, Cambridge, MA, 02139, USA., Paux E; GDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France., Eversole K; International Wheat Genome Sequencing Consortium (IWGSC), 5207 Wyoming Road, Bethesda, Maryland, 20816, USA., Adam-Blondon AF; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France., Quesneville H; URGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Jazyk: angličtina
Zdroj: Genome biology [Genome Biol] 2018 Aug 17; Vol. 19 (1), pp. 111. Date of Electronic Publication: 2018 Aug 17.
DOI: 10.1186/s13059-018-1491-4
Abstrakt: The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for in-depth exploration of the genome sequence together with additional linked datasets including physical maps, sequence variations, gene expression, and genetic and phenomic data from other international collaborative projects already stored in the GnpIS information system. The portal provides enhanced search and browser features that will facilitate the deployment of the latest genomics resources in wheat improvement.
Databáze: MEDLINE
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