Genome-wide mapping of sister chromatid exchange events in single yeast cells using Strand-seq.

Autor: Claussin C; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands., Porubský D; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands., Spierings DC; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands., Halsema N; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands., Rentas S; Terry Fox Laboratory, BC Cancer Agency, Vancouver, Canada., Guryev V; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands., Lansdorp PM; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands.; Terry Fox Laboratory, BC Cancer Agency, Vancouver, Canada.; Department of Medical Genetics, University of British Columbia, Vancouver, Canada., Chang M; European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Groningen, Netherlands.
Jazyk: angličtina
Zdroj: ELife [Elife] 2017 Dec 12; Vol. 6. Date of Electronic Publication: 2017 Dec 12.
DOI: 10.7554/eLife.30560
Abstrakt: Homologous recombination involving sister chromatids is the most accurate, and thus most frequently used, form of recombination-mediated DNA repair. Despite its importance, sister chromatid recombination is not easily studied because it does not result in a change in DNA sequence, making recombination between sister chromatids difficult to detect. We have previously developed a novel DNA template strand sequencing technique, called Strand-seq, that can be used to map sister chromatid exchange (SCE) events genome-wide in single cells. An increase in the rate of SCE is an indicator of elevated recombination activity and of genome instability, which is a hallmark of cancer. In this study, we have adapted Strand-seq to detect SCE in the yeast Saccharomyces cerevisiae . We provide the first quantifiable evidence that most spontaneous SCE events in wild-type cells are not due to the repair of DNA double-strand breaks.
Databáze: MEDLINE