Both genome and cytosol dynamics change in E. coli challenged with sublethal rifampicin.

Autor: Wlodarski M; Biological and Soft Systems, Cavendish Laboratory, University of Cambridge, United Kingdom., Raciti B, Kotar J, Cosentino Lagomarsino M, Fraser GM, Cicuta P
Jazyk: angličtina
Zdroj: Physical biology [Phys Biol] 2017 Feb 16; Vol. 14 (1), pp. 015005. Date of Electronic Publication: 2017 Feb 16.
DOI: 10.1088/1478-3975/aa5b71
Abstrakt: While the action of many antimicrobial drugs is well understood at the molecular level, a systems-level physiological response to antibiotics remains largely unexplored. This work considers fluctuation dynamics of both the chromosome and cytosol in Escherichia coli, and their response to sublethal treatments of a clinically important antibiotic, rifampicin. We precisely quantify the changes in dynamics of chromosomal loci and cytosolic aggregates (a rheovirus nonstructural protein known as μNS-GFP), measuring short time-scale displacements across several hours of drug exposure. To achieve this we develop an empirical method correcting for photo-bleaching and loci size effects. This procedure allows us to characterize the dynamic response to rifampicin in different growth conditions, including a customised microfluidic device. We find that sub-lethal doses of rifampicin cause a small but consistent increase in motility of both the chromosomal loci and cytosolic aggregates. Chromosomal and cytosolic responses are consistent with each other and between different growth conditions.
Databáze: MEDLINE