| Autor: |
Allali J; LaBRI, UMR 5800 CNRS, Université Bordeaux, 351, Cours de la Libération, 33405 Talence Cédex, France., Saule C, Chauve C, d'Aubenton-Carafa Y, Denise A, Drevet C, Ferraro P, Gautheret D, Herrbach C, Leclerc F, de Monte A, Ouangraoua A, Sagot MF, Termier M, Thermes C, Touzet H |
| Jazyk: |
angličtina |
| Zdroj: |
Advances in bioinformatics [Adv Bioinformatics] 2012; Vol. 2012, pp. 893048. Date of Electronic Publication: 2012 May 23. |
| DOI: |
10.1155/2012/893048 |
| Abstrakt: |
The pairwise comparison of RNA secondary structures is a fundamental problem, with direct application in mining databases for annotating putative noncoding RNA candidates in newly sequenced genomes. An increasing number of software tools are available for comparing RNA secondary structures, based on different models (such as ordered trees or forests, arc annotated sequences, and multilevel trees) and computational principles (edit distance, alignment). We describe here the website BRASERO that offers tools for evaluating such software tools on real and synthetic datasets. |
| Databáze: |
MEDLINE |
| Externí odkaz: |
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