Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1
| Autor: | Madsen Curtis, Goni Moreno Angel, Palchick Zachary, P Umesh, Roehner Nicholas, Bartley Bryan, Bhatia Swapnil, Bhakta Shyam, Bissell Mike, Clancy Kevin, Cox Robert Sidney, Gorochowski Thomas, Grunberg Raik, Luna Augustin, McLaughlin James, Nguyen Tramy, Le Novere Nicolas, Pocock Matthew, Sauro Herbert, Scott-Brown James, Sexton John T., Stan Guy-Bart, Tabor Jeffrey J., Voigt Christopher A., Zundel Zach, Myers Chris, Beal Jacob, Wipat Anil |
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| Jazyk: | angličtina |
| Rok vydání: | 2019 |
| Předmět: | |
| Zdroj: | Journal of Integrative Bioinformatics, Vol 16, Iss 2 (2019) |
| Druh dokumentu: | article |
| ISSN: | 1613-4516 2018-0101 |
| DOI: | 10.1515/jib-2018-0101 |
| Popis: | People who are engineering biological organisms often find it useful to communicate in diagrams, both about the structure of the nucleic acid sequences that they are engineering and about the functional relationships between sequence features and other molecular species . Some typical practices and conventions have begun to emerge for such diagrams. The Synthetic Biology Open Language Visual (SBOL Visual) has been developed as a standard for organizing and systematizing such conventions in order to produce a coherent language for expressing the structure and function of genetic designs. This document details version 2.1 of SBOL Visual, which builds on the prior SBOL Visual 2.0 standard by expanding diagram syntax to include methods for showing modular structure and mappings between elements of a system, interactions arrows that can split or join (with the glyph at the split or join indicating either superposition or a chemical process), and adding new glyphs for indicating genomic context (e.g., integration into a plasmid or genome) and for stop codons. |
| Databáze: | Directory of Open Access Journals |
| Externí odkaz: |
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