Genomic evidence for adaptation to tuberculosis in the Andes before European contact

Autor: Sophie K. Joseph, Nicola Rambaldi Migliore, Anna Olivieri, Antonio Torroni, Amanda C. Owings, Michael DeGiorgio, Wladimir Galarza Ordóñez, J.J. Ortiz Aguilú, Fabricio González-Andrade, Alessandro Achilli, John Lindo
Jazyk: angličtina
Rok vydání: 2023
Předmět:
Zdroj: iScience, Vol 26, Iss 2, Pp 106034- (2023)
Druh dokumentu: article
ISSN: 2589-0042
DOI: 10.1016/j.isci.2023.106034
Popis: Summary: Most studies focusing on human high-altitude adaptation in the Andean highlands have thus far been focused on Peruvian populations. We present high-coverage whole genomes from Indigenous people living in the Ecuadorian highlands and perform multi-method scans to detect positive natural selection. We identified regions of the genome that show signals of strong selection to both cardiovascular and hypoxia pathways, which are distinct from those uncovered in Peruvian populations. However, the strongest signals of selection were related to regions of the genome that are involved in immune function related to tuberculosis. Given our estimated timing of this selection event, the Indigenous people of Ecuador may have adapted to Mycobacterium tuberculosis thousands of years before the arrival of Europeans. Furthermore, we detect a population collapse that coincides with the arrival of Europeans, which is more severe than other regions of the Andes, suggesting differing effects of contact across high-altitude populations.
Databáze: Directory of Open Access Journals