Protein structure prediction based on particle swarm optimization and tabu search strategy

Autor: Yu Shuchun, Li Xianxiang, Tian Xue, Pang Ming
Jazyk: angličtina
Rok vydání: 2022
Předmět:
Zdroj: BMC Bioinformatics, Vol 23, Iss S10, Pp 1-10 (2022)
Druh dokumentu: article
ISSN: 1471-2105
DOI: 10.1186/s12859-022-04888-4
Popis: Abstract Background The stability of protein sequence structure plays an important role in the prevention and treatment of diseases. Results In this paper, particle swarm optimization and tabu search are combined to propose a new method for protein structure prediction. The experimental results show that: for four groups of artificial protein sequences with different lengths, this method obtains the lowest potential energy value and stable structure prediction results, and the effect is obviously better than the other two comparison methods. Taking the first group of protein sequences as an example, our method improves the prediction of minimum potential energy by 127% and 7% respectively. Conclusions Therefore, the method proposed in this paper is more suitable for the prediction of protein structural stability.
Databáze: Directory of Open Access Journals
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