Development of a Fully Cross-Validated Bayesian Network Approach for Local Control Prediction in Lung Cancer
| Autor: | Daniel L. McShan, Feng-Ming Kong, Dipankar Ray, Shruti Jolly, Randall K. Ten Haken, Martha M. Matuszak, Yi Luo, Issam El Naqa, Theodore Lawrence |
|---|---|
| Rok vydání: | 2019 |
| Předmět: |
Markov blanket
Computer science Feature extraction Bayesian network Tumor response computer.software_genre Article Atomic and Molecular Physics and Optics Sampling process Feature (machine learning) Radiology Nuclear Medicine and imaging Sensitivity (control systems) Data mining Instrumentation computer |
| Zdroj: | IEEE Transactions on Radiation and Plasma Medical Sciences. 3:232-241 |
| ISSN: | 2469-7303 2469-7311 |
| DOI: | 10.1109/trpms.2018.2832609 |
| Popis: | The purpose of this study is to demonstrate that a Bayesian network (BN) approach can explore hierarchical biophysical relationships that influence tumor response and predict tumor local control (LC) in non-small-cell lung cancer (NSCLC) patients before and during radiotherapy from a large-scale dataset. Our BN building approach has two steps. First, relevant biophysical predictors influencing LC before and during the treatment are selected through an extended Markov blanket (eMB) method. From this eMB process, the most robust BN structure for LC prediction was found via a wrapper-based approach. Sixty-eight patients with complete feature information were used to identify a full BN model for LC prediction before and during the treatment. Fifty more recent patients with some missing information were reserved for independent testing of the developed pre- and during-therapy BNs. A nested cross-validation (N-CV) was developed to evaluate the performance of the two-step BN approach. An ensemble BN model is generated from the N-CV sampling process to assess its similarity with the corresponding full BN model, and thus evaluate the sensitivity of our BN approach. Our results show that the proposed BN development approach is a stable and robust approach to identify hierarchical relationships among biophysical features for LC prediction. Furthermore, BN predictions can be improved by incorporating during treatment information. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|