Lactobacillus plantarum subsp. argentoratensis subsp. nov., isolated from vegetable matrices

Autor: Daniel K. Olukoya, Sandra Torriani, Anna Castioni, Franco Dellaglio, Giovanna E. Felis, Françoise Bringel
Přispěvatelé: Génétique moléculaire, génomique, microbiologie (GMGM), Université Louis Pasteur - Strasbourg I-Centre National de la Recherche Scientifique (CNRS)
Rok vydání: 2005
Předmět:
MESH: Sequence Analysis
DNA
vegetable sources
Phylogenetic analysis
subspecies status
Subspecies
Polymerase Chain Reaction
RNA
Ribosomal
16S
Vegetables
MESH: Phylogeny
Phylogeny
MESH: DNA
Ribosomal
Phylogenetic tree
food and beverages
General Medicine
RAPD
Bacterial Typing Techniques
MESH: RNA
Ribosomal
16S
Phenotype
MESH: Rec A Recombinases
MESH: Sp
MESH: Lactobacillus plantarum
DNA
Bacterial
Sequence analysis
Molecular Sequence Data
Biology
MESH: Phenotype
Microbiology
DNA
Ribosomal
MESH: Bacterial Typing Techniques
Species Specificity
Phylogenetics
MESH: Genes
rRNA
[SDV.BBM]Life Sciences [q-bio]/Biochemistry
Molecular Biology
Ecology
Evolution
Behavior and Systematics
MESH: Molecular Sequence Data
MESH: Polymerase Chain Reaction
Genes
rRNA
Chaperonin 60
Sequence Analysis
DNA
Ribosomal RNA
biology.organism_classification
MESH: DNA
Bacterial
GroEL
Rec A Recombinases
MESH: GroEL Protein
bacteria
Lactobacillus plantarum
Zdroj: International Journal of Systematic and Evolutionary Microbiology
International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2005, 55 (Pt 4), pp.1629-34. ⟨10.1099/ijs.0.63333-0⟩
ISSN: 1466-5026
1466-5034
Popis: Fourteen strains isolated from vegetable sources and identified as belonging to Lactobacillus plantarum presented an atypical pattern of amplification with a species-specific multiplex-PCR assay. Phylogenetic analysis of two protein-encoding genes, recA (encoding the recombinase A protein) and cpn60 (encoding the GroEL chaperonin), as well as phenotypic and genomic traits revealed a homogeneous group of very closely related strains for which subspecies status is proposed, with the name Lactobacillus plantarum subsp. argentoratensis. The type strain is DKO 22T (=CIP 108320T=DSM 16365T).
Databáze: OpenAIRE
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