Altererythrobacter flava sp. nov., a new member of the family Erythrobacteraceae, isolated from a surface seawater sample
Autor: | Dao-Feng Zhang, Yuan-Lan Zhang, Xiao-Mei Zhang |
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Rok vydání: | 2021 |
Předmět: |
DNA
Bacterial 0106 biological sciences 0301 basic medicine food.ingredient Biology 010603 evolutionary biology 01 natural sciences Microbiology 03 medical and health sciences food Genus Phylogenetics RNA Ribosomal 16S Botany Seawater Molecular Biology Phospholipids Phylogeny Base Composition Phylogenetic tree Strain (chemistry) Fatty Acids Altererythrobacter Sequence Analysis DNA General Medicine Erythrobacteraceae 16S ribosomal RNA Bacterial Typing Techniques 030104 developmental biology Orthologous Gene |
Zdroj: | Antonie van Leeuwenhoek. 114:497-506 |
ISSN: | 1572-9699 0003-6072 |
Popis: | A Gram-stain-negative, light yellow pigmented, non-motile and aerobic bacterial strain, designated HHU E2-1 T, was isolated from a surface seawater sample. The 16S rRNA gene sequence analysis indicated that HHU E2-1 T shared the highest sequence similarity to the type strain Qipengyuania gaetbuli DSM 16225 T (96.90%), which belongs to the family Erythrobacteraceae. Combined phylogeny of 288 single-copy orthologous gene clusters, analysis of average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH), average amino acid identity (AAI) and evolutionary distances suggested that HHU E2-1 T can be considered as a member of the genus Altererythrobacter based on the recently proposed standard for defining genera of Erythrobacteraceae. Strain HHU E2-1 T grew at 15–35 °C and pH 5.0–8.0, with optimum growth at 28 °C and pH 7.0. Tolerance to NaCl was up to 4% (w/v) with optimum growth in 2–3% NaCl. The major fatty acids (> 10%) were C18:1ω7c11-methyl, summed feature 3 (C16:1ω7c and/or C16:1ω6c), and summed feature 8 (C18:1ω7c and/or C18:1ω6c). The predominant isoprenoid quinone was ubiquinone-10. The genomic G + C content was 57.40%. On the basis of the phenotypic, phylogenetic and chemotaxonomic characterizations, HHU E2-1 T represents a novel species of the genus Altererythrobacter, for which the name Altererythrobacter flava sp. nov. is proposed. The type strain is HHU E2-1 T (= CGMCC 1.17394 T = KCTC 72835 T = MCCC 1K04226T). |
Databáze: | OpenAIRE |
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