Gut microbiome shifts with urbanization and potentially facilitates a zoonotic pathogen in a wading bird

Autor: Henry C. Adams, Anjelika D. Kidd, Catharine N. Welch, Emily W. Lankau, Maureen H. Murray, Erin K. Lipp, Sonia M. Hernandez, Taylor Ellison
Rok vydání: 2019
Předmět:
Bacterial Diseases
0301 basic medicine
Wildlife
Pathology and Laboratory Medicine
Urban Environments
Salmonella
RNA
Ribosomal
16S

11. Sustainability
Medicine and Health Sciences
Colonization
2. Zero hunger
Principal Component Analysis
0303 health sciences
Multidisciplinary
Ecology
biology
Salmonella enterica
Eukaryota
Genomics
Terrestrial Environments
Bacterial Pathogens
Trophic Interactions
Habitats
Intestines
Infectious Diseases
Community Ecology
Habitat
Medical Microbiology
Vertebrates
Medicine
Pathogens
Research Article
Animal Types
Science
030106 microbiology
Microbial Genomics
Microbiology
Birds
03 medical and health sciences
Enterobacteriaceae
Urbanization
Genetics
Animals
Microbiome
Microbial Pathogens
Ecosystem
Nutrition
030304 developmental biology
Eudocimus
Bacteria
030306 microbiology
Host (biology)
Ecology and Environmental Sciences
Organisms
Biology and Life Sciences
15. Life on land
biology.organism_classification
Diet
Gastrointestinal Microbiome
030104 developmental biology
Amniotes
Zoology
Zdroj: PLoS ONE, Vol 15, Iss 3, p e0220926 (2020)
PLoS ONE
Popis: Microbial communities in the gastrointestinal tract influence many aspects of host health, including metabolism and susceptibility to pathogen colonization. These relationships and the environmental and individual factors that drive them are relatively unexplored for free-living wildlife. We quantified the relationships between urban habitat use, diet, and age with microbiome composition and diversity for 82 American white ibises (Eudocimus albus) captured along an urban gradient in south Florida and tested whether gut microbial diversity was associated withSalmonella entericaprevalence. Shifts in community composition were significantly associated with urban land cover and, to a lesser extent, diets higher in provisioned food. The diversity of genera was negatively associated with community composition associated with urban land cover, positively associated with age class, and negatively associated withSalmonellashedding. Our results suggest that shifts in both habitat use and diet for urban birds significantly alter gut microbial composition and diversity in ways that may influence health and pathogen susceptibility as species adapt to urban habitats.
Databáze: OpenAIRE