ArrayExpress—a public database of microarray experiments and gene expression profiles
Autor: | Nikolay Kolesnykov, Ele Holloway, Anjan Sharma, E. William, Roby Mani, Anna Farne, Helen Parkinson, Misha Kapushesky, P. Lilja, Niran Abeygunawardena, Tim F. Rayner, Mohammadreza Shojatalab, Richard M.R. Coulson, Margus Lukk, Ugis Sarkans, Alvis Brazma |
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Jazyk: | angličtina |
Rok vydání: | 2006 |
Předmět: |
Microarray
Biology computer.software_genre Fungal Proteins 03 medical and health sciences Mice User-Computer Interface 0302 clinical medicine Gene expression Databases Genetic Genetics Animals Humans 030304 developmental biology Oligonucleotide Array Sequence Analysis 0303 health sciences Internet Database Microarray analysis techniques Arabidopsis Proteins Gene Expression Profiling Articles Data warehouse Rats Gene expression profiling Gene nomenclature Data exchange 030220 oncology & carcinogenesis Functional genomics computer |
Zdroj: | Nucleic Acids Research |
ISSN: | 1362-4962 0305-1048 |
Popis: | UNLABELLED ArrayExpress is a public database for high throughput functional genomics data. ArrayExpress consists of two parts--the ArrayExpress Repository, which is a MIAME supportive public archive of microarray data, and the ArrayExpress Data Warehouse, which is a database of gene expression profiles selected from the repository and consistently re-annotated. Archived experiments can be queried by experiment attributes, such as keywords, species, array platform, authors, journals or accession numbers. Gene expression profiles can be queried by gene names and properties, such as Gene Ontology terms and gene expression profiles can be visualized. ArrayExpress is a rapidly growing database, currently it contains data from >50,000 hybridizations and >1,500,000 individual expression profiles. ArrayExpress supports community standards, including MIAME, MAGE-ML and more recently the proposal for a spreadsheet based data exchange format: MAGE-TAB. AVAILABILITY www.ebi.ac.uk/arrayexpress. |
Databáze: | OpenAIRE |
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