Nucleotide sequence analysis of the glycoprotein gene of putative spring viraemia of carp virus and pike fry rhabdovirus isolates reveals four genogroups
| Autor: | K. L. Denham, Keith Way, C. T. Y. Liu, P. F. Dixon, David M. Stone, G. R. Taylor, W. Ahne, A. M. Sheppard |
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| Rok vydání: | 2003 |
| Předmět: |
Carps
Genotype Sequence analysis viruses Molecular Sequence Data Aquatic Science Virus Fish Diseases stomatognathic system Rhabdoviridae Infections Sequence Homology Nucleic Acid Animals Amino Acid Sequence Mononegavirales Carp Gene Phylogeny Ecology Evolution Behavior and Systematics Glycoproteins Genetics Base Sequence biology Reverse Transcriptase Polymerase Chain Reaction Nucleic acid sequence virus diseases biology.organism_classification Virology Grass carp Esocidae Rhabdoviridae Sequence Alignment |
| Zdroj: | Diseases of Aquatic Organisms. 53:203-210 |
| ISSN: | 1616-1580 0177-5103 |
| DOI: | 10.3354/dao053203 |
| Popis: | RT-PCR methods have been applied to the detection and sequencing of the glycoprotein gene of putative spring viraemia of carp viruses (SVCV) and pike fry rhabdoviruses (PFRV), includ- ing isolates from tench, grass carp, roach, bream and false harlequin, sheatfish and orfe. Phylogenetic analysis of a 550 nucleotide (nt) region of the glycoprotein gene identified 4 groups, I to IV. Signifi- cantly, the majority of viruses previously identified as PFRV formed a distinct cluster (Genogroup IV) which shared |
| Databáze: | OpenAIRE |
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