RETRACTED ARTICLE: Three factor nonnegative matrix factorization based HE stain unmixing in histopathological images
Autor: | N. M. Sudharsan, Mohamed Yacin Sikkandar, K. R. Kavitha, G. R. Hemalakshmi, N. B. Prakash, T. Jayasankar |
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Rok vydání: | 2020 |
Předmět: |
General Computer Science
Eosin business.industry Computer science H&E stain Context (language use) Pattern recognition 02 engineering and technology Haematoxylin 021001 nanoscience & nanotechnology Stain 030218 nuclear medicine & medical imaging Staining Non-negative matrix factorization Histological staining 03 medical and health sciences chemistry.chemical_compound 0302 clinical medicine chemistry Artificial intelligence 0210 nano-technology business |
Zdroj: | Journal of Ambient Intelligence and Humanized Computing. 12:6505-6513 |
ISSN: | 1868-5145 1868-5137 |
DOI: | 10.1007/s12652-020-02265-8 |
Popis: | Histological staining facilitates the microscopic study of diseased tissues in clinical investigations. Staining by fluorescent dyes enhances the tissue contrast, highlighting the important features. Haematoxylin and Eosin staining protocol is the most common in the histopathological analysis of cells and tissues in cancer diagnosis. HE staining provides a visual representation of tissue abnormalities, distinguishing cell nuclei and acidophilic structures. Stain unmixing is an equally vital procedure which decomposes the multi-stained image into individual stain components. These components are essential for visual examination of the interaction between the dye and the specific tissues. This manuscript put forwards an original cell destaining approach based on a three factor Nonnegative Matrix Factorization which separates the H and E components from the HE stained image. The experimental results with standard datasets and performance metrics demonstrate the robustness of the method yielding better PSNR and SSIM values for stain separation compared to similar works in this context. The PSNR values around 30 dB are achieved by the proposed unmixing approach which is more than 10 dB compared to the benchmark approaches. Similarly, the SSIM values are obtained in the range 0.42–0.73, signifying strong structural elements. The proposed method can be further extended to study the interaction of other activators in the wound repair process under cancer progression. |
Databáze: | OpenAIRE |
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