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The paper “Model-based local thresholding for canopy hemispherical photography” describes a method that is a framework in which different algorithms could be developed. The basic software needed for algorithm developing was programmed in the R package CAnopy IMage ANalysis (https://github.com/GastonMauroDiaz/caiman). The algorithm described in the paper is a R script published as a gist (https://goo.gl/zygWDN). This project contains data needed to run the script. Also, includes the templates needed to calibrate the camera. |
