Whole Genome Sequences of the Tea Leaf Spot Pathogen Didymella segeticola
| Autor: | Xian Wu, Zhuo Chen, Delu Wang, Yafeng Ren, Xue Wang, Dongxue Li, Xingtao Bao, Baoan Song, Xiaozhen Zhao, Yong Wang |
|---|---|
| Rok vydání: | 2019 |
| Předmět: |
0106 biological sciences
0301 basic medicine Genetics biology Fungal genetics food and beverages Plant Science biology.organism_classification 01 natural sciences Genome 03 medical and health sciences 030104 developmental biology Phoma Leaf spot Camellia sinensis KEGG Agronomy and Crop Science Gene Pathogen 010606 plant biology & botany |
| Zdroj: | Phytopathology®. 109:1676-1678 |
| ISSN: | 1943-7684 0031-949X |
| DOI: | 10.1094/phyto-02-19-0050-a |
| Popis: | The fungal pathogen Didymella segeticola (basionym Phoma segeticola) causes leaf spot on tea (Camellia sinensis), which leads to a loss in tea leaf production in Guizhou Province, China. D. segeticola isolate GZSQ-4 was sequenced using Illumina HiSeq and Pacific Biosciences (PacBio) RS technologies, and then assembled to approximately 33.4 Mbp with a scaffold N50 value of approximately 2.3 Mbp. In total, 10,893 genes were predicted using the Nonredundant, Gene Ontology, Clusters of Orthologous Groups, Kyoto Encyclopedia of Genes and Genomes, and SWISS-PROT databases. The whole-genome sequence of D. segeticola will provide a resource for future research on host−pathogen interactions, determination of trait-specific genes, pathogen evolution, and plant−host adaptation mechanisms. |
| Databáze: | OpenAIRE |
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