| Autor: |
Nemukhin, A. V., Grigorenko, B. L., Topol, I. A., Burt, S. K. |
| Zdroj: |
Journal of Computational Chemistry; September 2003, Vol. 24 Issue: 12 p1410-1420, 11p |
| Abstrakt: |
A new version of the QM/MM method, which is based on the effective fragment potential (EFP) methodology [Gordon, M. et al., J Phys Chem A 2001, 105, 293] but allows flexible fragments, is verified through calculations of model molecular systems suggested by different authors as challenging tests for QM/MM approaches. For each example, the results of QM/MM calculations for a partitioned system are compared to the results of an all‐electron ab initioquantum chemical study of the entire system. In each case we were able to achieve approximately similar or better accuracy of the QM/MM results compared to those described in original publications. In all calculations we kept the same set of parameters of our QM/MM scheme. A new test example is considered when calculating the potential of internal rotation in the histidine dipeptide around the CαCβside chain bond. © 2003 Wiley Periodicals, Inc. J Comput Chem 24: 1410–1420, 2003 |
| Databáze: |
Supplemental Index |
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