A Redox-Reversible Switch of DNA Hydrogen Bonding and Structure.

Autor: Alawneh A; Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309-0215, United States., Wettasinghe AP; Department of Physics, The University of Texas at Dallas, 800 West Campbell Road, SCI 10, Richardson, Texas 75080, United States., McMullen R; Department of Physics, The University of Texas at Dallas, 800 West Campbell Road, SCI 10, Richardson, Texas 75080, United States., Seifi MO; Department of Physics, The University of Texas at Dallas, 800 West Campbell Road, SCI 10, Richardson, Texas 75080, United States., Breton I Jr; Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309-0215, United States., Slinker JD; Department of Physics, The University of Texas at Dallas, 800 West Campbell Road, SCI 10, Richardson, Texas 75080, United States.; Department of Chemistry, The University of Texas at Dallas, 800 West Campbell Road, SCI 10, Richardson, Texas 75080 United States.; Department of Materials Science and Engineering, The University of Texas at Dallas, 800 West Campbell Road, SCI 10, Richardson, Texas 75080, United States., Kuchta RD; Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309-0215, United States.
Jazyk: angličtina
Zdroj: ACS applied bio materials [ACS Appl Bio Mater] 2024 Aug 19; Vol. 7 (8), pp. 5308-5317. Date of Electronic Publication: 2024 Jul 08.
DOI: 10.1021/acsabm.4c00529
Abstrakt: Modulating molecular structure and function at the nanoscale drives innovation across wide-ranging technologies. Electrical control of the bonding of individual DNA base pairs endows DNA with precise nanoscale structural reconfigurability, benefiting efforts in DNA origami and actuation. Here, alloxazine DNA base surrogates were synthesized and incorporated into DNA duplexes to function as a redox-active switch of hydrogen bonding. Circular dichroism (CD) revealed that 24-mer DNA duplexes containing one or two alloxazines exhibited CD spectra and melting transitions similar to DNA with only canonical bases, indicating that the constructs adopt a B-form conformation. However, duplexes were not formed when four or more alloxazines were incorporated into a 24-mer strand. Thiolated duplexes incorporating alloxazines were self-assembled onto multiplexed gold electrodes and probed electrochemically. Square-wave voltammetry (SWV) revealed a substantial reduction peak centered at -0.272 V vs Ag/AgCl reference. Alternating between alloxazine oxidizing and reducing conditions modulated the SWV peak in a manner consistent with the formation and loss of hydrogen bonding, which disrupts the base pair stacking and redox efficiency of the DNA construct. These alternating signals support the assertion that alloxazine can function as a redox-active switch of hydrogen bonding, useful in controlling DNA and bioinspired assemblies.
Databáze: MEDLINE