The IPASC data format: A consensus data format for photoacoustic imaging.

Autor:	Gröhl J; Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom.; Department of Physics, University of Cambridge, Cambridge, United Kingdom., Hacker L; Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom.; Department of Physics, University of Cambridge, Cambridge, United Kingdom., Cox BT; Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom., Dreher KK; German Cancer Research Center, Division of Computer Assisted Medical Interventions, Heidelberg, Germany.; Heidelberg University, Faculty of Physics and Astronomy, Heidelberg, Germany., Morscher S; iThera Medical GmbH, Munich, Germany., Rakotondrainibe A; iThera Medical GmbH, Munich, Germany., Varray F; Univ Lyon, INSA-Lyon, Université Claude Bernard Lyon 1, CNRS, Inserm, CREATIS UMR 5220, U1294, F-69621, Lyon, France., Yip LCM; Department of Medical Biophysics, Schulich School of Medicine and Dentistry, Western University, London, Canada.; Imaging Program, Lawson Health Research Institute, London, Canada., Vogt WC; Center for Devices and Radiological Health, US Food and Drug Administration, Silver Spring, MD, United States., Bohndiek SE; Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom.; Department of Physics, University of Cambridge, Cambridge, United Kingdom.
Jazyk:	angličtina
Zdroj:	Photoacoustics [Photoacoustics] 2022 Feb 26; Vol. 26, pp. 100339. Date of Electronic Publication: 2022 Feb 26 (Print Publication: 2022).
DOI:	10.1016/j.pacs.2022.100339
Abstrakt:	Photoacoustic imaging (PAI) is an emerging modality that has shown promise for improving patient management in a range of applications. Unfortunately, the current lack of uniformity in PAI data formats compromises inter-user data exchange and comparison, which impedes: technological progress; effective research collaboration; and efforts to deliver multi-centre clinical trials. To overcome this challenge, the International Photoacoustic Standardisation Consortium (IPASC) has established a data format with a defined consensus metadata structure and developed an open-source software application programming interface (API) to enable conversion from proprietary file formats into the IPASC format. The format is based on Hierarchical Data Format 5 (HDF5) and designed to store photoacoustic raw time series data. Internal quality control mechanisms are included to ensure completeness and consistency of the converted data. By unifying the variety of proprietary data and metadata definitions into a consensus format, IPASC hopes to facilitate the exchange and comparison of PAI data. Competing Interests: One or more of the authors of this paper have disclosed potential or pertinent conflicts of interest, which may include receipt of payment, either direct or indirect, institutional support, or association with an entity in the biomedical field which may be perceived to have potential conflict of interest with this work. For full disclosure statements refer to https://doi.org/10.1016/j.pacs.2022.100339. Sarah Bohndiek reports a relationship with EPFL Center for Biomedical Imaging that includes: speaking and lecture fees. Sarah Bohndiek reports a relationship with PreXion Inc that includes: funding grants. Sarah Bohndiek reports a relationship with iThera Medical GmbH that includes: non-financial support. Avotra Rakotondrainibe reports a relationship with iThera Medical GmbH that includes: employment. Stefan Morscher reports a relationship with iThera Medical GmbH that includes: employment. (© 2022 The Authors.)
Databáze:	MEDLINE
Externí odkaz:	Zobrazit plný text záznamu