Differential Expression Gene Explorer (DrEdGE): a tool for generating interactive online visualizations of gene expression datasets.
| Autor: | Tintori SC; Department of Biology., Golden P; School of Information and Library Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA., Goldstein B; Department of Biology. |
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| Jazyk: | angličtina |
| Zdroj: | Bioinformatics (Oxford, England) [Bioinformatics] 2020 Apr 15; Vol. 36 (8), pp. 2581-2583. |
| DOI: | 10.1093/bioinformatics/btz972 |
| Abstrakt: | Summary: Differential Expression Gene Explorer (DrEdGE) is a web-based tool that guides genomicists through easily creating interactive online data visualizations, which colleagues can query according to their own conditions to discover genes, samples or patterns of interest. We demonstrate DrEdGE's features with three example websites generated from publicly available datasets-human neuronal tissue, mouse embryonic tissue and Caenorhabditis elegans whole embryos. DrEdGE increases the utility of large genomics datasets by removing technical obstacles to independent exploration. Availability and Implementation: Freely available at http://dredge.bio.unc.edu. Supplementary Information: Supplementary data are available at Bioinformatics online. (© The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.) |
| Databáze: | MEDLINE |
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