Draft Genome Resources of Two Strains ("ESVL" and "IVIA5901") of Xylella fastidiosa Associated with Almond Leaf Scorch Disease in Alicante, Spain.

Autor:	Giampetruzzi A; 1 Dipartimento di Scienze del Suolo della Pianta e degli Alimenti, Università degli Studi di Bari Aldo Moro, 70126 Bari, Italy., Velasco-Amo MP; 2 Institute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (IAS-CSIC), 14004 Córdoba, Spain., Marco-Noales E; 3 Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (IVIA), 46113 Moncada, Spain., Montes-Borrego M; 2 Institute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (IAS-CSIC), 14004 Córdoba, Spain., Román-Écija M; 2 Institute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (IAS-CSIC), 14004 Córdoba, Spain., Navarro I; 3 Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (IVIA), 46113 Moncada, Spain., Monterde A; 3 Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (IVIA), 46113 Moncada, Spain., Barbé S; 3 Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (IVIA), 46113 Moncada, Spain., Almeida RPP; 4 Department of Environmental Science, Policy and Management, University of California, Berkeley 94720; and., Saldarelli P; 5 Istituto per la Protezione Sostenibile delle Piante, CNR, 70126 Bari, Italy., Saponari M; 5 Istituto per la Protezione Sostenibile delle Piante, CNR, 70126 Bari, Italy., Montilon V; 1 Dipartimento di Scienze del Suolo della Pianta e degli Alimenti, Università degli Studi di Bari Aldo Moro, 70126 Bari, Italy., Savino VN; 1 Dipartimento di Scienze del Suolo della Pianta e degli Alimenti, Università degli Studi di Bari Aldo Moro, 70126 Bari, Italy., Boscia D; 5 Istituto per la Protezione Sostenibile delle Piante, CNR, 70126 Bari, Italy., Landa BB; 2 Institute for Sustainable Agriculture, Consejo Superior de Investigaciones Científicas (IAS-CSIC), 14004 Córdoba, Spain.
Jazyk:	angličtina
Zdroj:	Phytopathology [Phytopathology] 2019 Feb; Vol. 109 (2), pp. 219-221. Date of Electronic Publication: 2018 Dec 28.
DOI:	10.1094/PHYTO-09-18-0328-A
Abstrakt:	An outbreak of Xylella fastidiosa subsp. multiplex sequence type ST6 was discovered in 2017 in mainland Spain affecting almond trees. Two cultured almond strains, "ESVL" and "IVIA5901," were subjected to high throughput sequencing and the draft genomes assembled. Phylogenetic analysis conclusively indicated they belong to the subspecies multiplex, and pairwise comparisons of the chromosomal genomes showed an average nucleotide identity higher than 99%. Interestingly, the two strains differ for the presence of the plasmids pXF64-Hb_ESVL and pUCLA-ESVL detected only in the ESVL strain. The availability of these draft genomes contribute to extend the European genomic sequence dataset, a first step toward setting new research to elucidate the pathway of introduction and spread of the numerous strains of this subspecies so far detected in Europe.
Databáze:	MEDLINE
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