Use of whole genome sequencing to complement characterisation of a typhoid fever outbreak among a Marshallese community: Oklahoma, 2015.

Autor: Burnsed LJ; Oklahoma State Department of Health, Oklahoma City, OK 73117, USA., Kovar LD; Oklahoma State Department of Health, Oklahoma City, OK 73117, USA., Angelo KM; Centers for Disease Control and Prevention, Atlanta, GA, 30329, USA., Trees EK; Centers for Disease Control and Prevention, Atlanta, GA, 30329, USA., Concepción-Acevedo J; Centers for Disease Control and Prevention, Atlanta, GA, 30329, USA., McDermott MD; Oklahoma State Department of Health, Oklahoma City, OK 73117, USA., Wagner D; Centers for Disease Control and Prevention, Atlanta, GA, 30329, USA.; IHRC Inc., Atlanta, GA, 30346, USA., Bradley KK; Oklahoma State Department of Health, Oklahoma City, OK 73117, USA.
Jazyk: angličtina
Zdroj: Epidemiology and infection [Epidemiol Infect] 2018 Sep 21; Vol. 147, pp. e11. Date of Electronic Publication: 2018 Sep 21.
DOI: 10.1017/S0950268818002601
Abstrakt: Typhoid fever is an illness caused by Salmonella enterica serotype Typhi. In developing regions, it affects an estimated 20 million people annually, causing 200 000 deaths. Although uncommon, cases occur in the USA each year, predominantly due to international travel. During February 2015, the Oklahoma State Department of Health (OSDH) detected an outbreak of typhoid fever among residents of northwestern Oklahoma. OSDH conducted case-patient interviews to identify the source and symptomatic contacts. Whole genome sequencing (WGS) was performed to characterise the genetic relatedness of isolates among the four outbreak-associated pulsed-field gel electrophoresis (PFGE) patterns. We identified 38 cases, 25 confirmed and 13 probable, in two states. WGS revealed a 0-10 single-nucleotide polymorphism variation between isolates. Although we were unable to determine the source, almost all case-patients were members of the Marshallese community that attended a common event in Oklahoma, or were contacts to a confirmed case. This is the largest outbreak of typhoid fever in the USA since 1989, and first to apply WGS to complement interpretation of PFGE results during a typhoid fever outbreak investigation. This investigation illustrates the potential risk of outbreaks among communities comprised of international populations from regions where typhoid fever remains endemic.
Databáze: MEDLINE