Development of the method for identification of selected populations of torpedo scad, Megalaspis cordyla (Linnaeus, 1758), using microsatellite DNA analyses. CELFISH project - Part 4.

Autor: Kempter J; Department of Aquaculture, Faculty of Food Science and Fisheries, West Pomeranian University of Technology, Szczecin, Poland. Electronic address: jkempter@zut.edu.pl., Kielpinski M; Department of Aquaculture, Faculty of Food Science and Fisheries, West Pomeranian University of Technology, Szczecin, Poland. Electronic address: mkielpinski@zut.edu.pl., Panicz R; Department of Aquaculture, Faculty of Food Science and Fisheries, West Pomeranian University of Technology, Szczecin, Poland. Electronic address: rpanicz@zut.edu.pl., Prüffer K; Department of Genetics and Animal Breeding, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Szczecin, Poland. Electronic address: Kaja.Pruffer@zut.edu.pl., Keszka S; Department of Aquaculture, Faculty of Food Science and Fisheries, West Pomeranian University of Technology, Szczecin, Poland. Electronic address: skeszka@zut.edu.pl.
Jazyk: angličtina
Zdroj: Food chemistry [Food Chem] 2017 Apr 15; Vol. 221, pp. 944-949. Date of Electronic Publication: 2016 Nov 17.
DOI: 10.1016/j.foodchem.2016.11.070
Abstrakt: Catch and consumption of torpedo scad (Megalaspis cordyla) over the western Indian Ocean, but also the western Pacific from Japan to Australia is constantly increasing. Taking into account the degree of exploitation and missing information on the population structure of torpedo scad stocks it is crucial to provide population data. The analysis included individuals obtained in 2012 and 2013 from local markets in Madagascar, Tanzania, Vietnam and Cambodia and after successful DNA extraction fragment of the nuclear rhodopsin gene (RH1) and 9 microsatellite regions (SSRs) were amplified and analysed. Based on the obtained results it was found that there was no 100% overlap between the compared RH1 sequences and those from GenBank. In the case of the studied SSRs, the results allowed the initial characterisation and assessment of the genetic diversity of populations. Moreover, population assignment test distinguished the studied populations into two geographically distant subpopulations.
(Copyright © 2016 Elsevier Ltd. All rights reserved.)
Databáze: MEDLINE
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