Zobrazeno 1 - 10
of 371
pro vyhledávání: '"whole genome shotgun"'
Autor:
Minsheng Xu, Haiyi Ke, Yingan Zang, Hongchao Gou, Dongxia Yang, Keda Shi, Kunli Zhang, Yan Li, Zhiyong Jiang, Pinpin Chu, Shaolun Zhai, Chunling Li
Publikováno v:
Frontiers in Microbiology, Vol 15 (2024)
Actinobacillus pleuropneumoniae, a significant respiratory pig pathogen, is causing substantial losses in the global swine industry. The resistance spectrum of A. pleuropneumoniae is expanding, and multidrug resistance is a severe issue. Horizontal g
Externí odkaz:
https://doaj.org/article/036775289aba4c83ba49bb9bf1ff9aac
Autor:
Xiaolei Ma, Emily Brinker, Christopher R. Lea, Diane Delmain, Erin D. Chamorro, Douglas R. Martin, Emily C. Graff, Xu Wang
Publikováno v:
Frontiers in Microbiology, Vol 15 (2024)
IntroductionMicrobial population structures within fecal samples are vital for disease screening, diagnosis, and gut microbiome research. The two primary methods for collecting feline fecal samples are: (1) using a fecal loop, which retrieves a recta
Externí odkaz:
https://doaj.org/article/b631c46a76934454816b0abb2e7fd77e
Publikováno v:
Data in Brief, Vol 53, Iss , Pp 110155- (2024)
The mangrove ecosystem contains sediment microorganisms that play a crucial part in the decomposition of organic matter and the cycling of water and nutrients in the mangrove. Here we present the metagenomics whole genome shotgun (mWGS) sequence data
Externí odkaz:
https://doaj.org/article/1cafd95a603f401ab66c6eb3623bf049
Autor:
Janno Berty Bradly Bernadus, Jantje Pelealu, Grace Debbie Kandou, Arthur Gehart Pinaria, Juliet Merry Eva Mamahit, Trina Ekawati Tallei
Publikováno v:
Infectious Disease Reports, Vol 15, Iss 5, Pp 549-563 (2023)
The aim of this study was to investigate the microbial diversity encompassing bacteria, fungi, and viruses within the composite microbial community associated with Aedes aegypti mosquitoes in Manado, Indonesia, using a whole-genome shotgun metagenomi
Externí odkaz:
https://doaj.org/article/cddc29cd6a3f4d3cacc8b2674393b23e
Autor:
Farzana Diba, M. Nazmul Hoque, M. Shaminur Rahman, Farhana Haque, Khondaker Md. Jaminur Rahman, Md. Moniruzzaman, Mala Khan, M. Anwar Hossain, Munawar Sultana
Publikováno v:
BMC Microbiology, Vol 23, Iss 1, Pp 1-20 (2023)
Abstract Background Arsenic (As) and its species are major pollutants in ecological bodied including groundwater in Bangladesh rendering serious public health concern. Bacteria with arsenotrophic genes have been found in the aquifer, converting toxic
Externí odkaz:
https://doaj.org/article/517161b40a4e4c9ba8ed561e08ffae50
Autor:
Atsushi Togawa, Kinuyo Chikamatsu, Akiko Takaki, Yuki Matsumoto, Michinobu Yoshimura, Shigeo Tsuchiya, Shota Nakamura, Satoshi Mitarai
Publikováno v:
International Journal of Infectious Diseases, Vol 133, Iss , Pp 14-17 (2023)
Objectives: To report an isolate of Mycobacterium intracellulare subsp. chimaera with multiple mutations in 16S ribosomal RNA (rRNA) gene, resulting in the false-negative reaction to the transcription-reverse transcription concerted (TRC) method for
Externí odkaz:
https://doaj.org/article/9ae66a0ad8ca446d89b4f6feefca9be7
Publikováno v:
Frontiers in Microbiology, Vol 15 (2024)
IntroductionThe short-chain fatty acids (SCFAs) contained in breast milk play a key role in infant growth, affecting metabolism and enhancing intestinal immunity by regulating inflammation.MethodsIn order to examine the associations between the micro
Externí odkaz:
https://doaj.org/article/672f78a07c8f4f3d90581aa36c1ea9a8
Autor:
Daniel Sakyi Agyirifo, Theophilus Abonyi Mensah, Andrews Senyenam Yao Senya, Alphonse Hounkpe, Cindy Deladem Dornyoh, Emmanuel Plas Otwe
Publikováno v:
Heliyon, Vol 9, Iss 11, Pp e21584- (2023)
The impact of staphylococci on food poisoning and infections could be higher than previously reported. In this study, we characterised the occurrence and coexistence of antimicrobial resistance and virulence genes of staphylococci isolates in foods.
Externí odkaz:
https://doaj.org/article/dfc9a34a5af645be94592e2776f0040a
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 21, Iss , Pp 2352-2364 (2023)
Third-generation sequencing can be used in human cancer genomics and epigenomic research. Oxford Nanopore Technologies (ONT) recently released R10.4 flow cell, which claimed an improved read accuracy compared to R9.4.1 flow cell. To evaluate the bene
Externí odkaz:
https://doaj.org/article/583de7f793a6450f843c50d07c3ea0b1
Autor:
Freida Blostein, Deesha Bhaumik, Elyse Davis, Elizabeth Salzman, Kerby Shedden, Melissa Duhaime, Kelly M. Bakulski, Daniel W. McNeil, Mary L. Marazita, Betsy Foxman
Publikováno v:
Microbiome, Vol 10, Iss 1, Pp 1-24 (2022)
Abstract Background Early childhood caries (ECC)—dental caries (cavities) occurring in primary teeth up to age 6 years—is a prevalent childhood oral disease with a microbial etiology. Streptococcus mutans was previously considered a primary cause
Externí odkaz:
https://doaj.org/article/d6e2ae20f4cf43dfafce4805f2d4f828