Oligonucleotide microarray methodology for taxonomic and functional monitoringof microbial community composition

Autor: M. Kyselková, J. Kopecký, M. Ságová-Marečková, G.L. Grundmann, Y. Moënne-Loccoz

Publikováno v: Plant, Soil and Environment, Vol 55, Iss 9, Pp 379-388 (2009)

Microarray analysis is a cultivation-independent, high-throughput technology that can be used for direct and simultaneous identification of microorganisms in complex environmental samples. This review summarizes current methodologies for oligonucleot

Externí odkaz: https://doaj.org/article/a69afd9aedea4ccb9ca8c196947503c5

Rhizosphere microbial communities associated with Rhizoctonia damage at the field and disease patch scale

Autor: Daniel Muller, Yvan Moënne-Loccoz, John A. Kirkegaard, Juliana Almario, Alan Richardson, Vadakattu V. S. R. Gupta, Suzanne Donn

Publikováno v: Applied Soil Ecology
Applied Soil Ecology, Elsevier, 2014, 78, pp.37-47. 〈10.1016/j.apsoil.2014.02.001〉
Applied Soil Ecology, Elsevier, 2014, 78, pp.37-47. ⟨10.1016/j.apsoil.2014.02.001⟩

International audience; Rhizoctonia solani AG-8 is a major root pathogen in wheat (Triticum aestivum L.) systems worldwide and while natural disease suppression can develop under continuous cropping, this is not always the case. The main aim of our w

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::709430a5d45aa0437ab68b3d7225c596
https://doi.org/10.1016/j.apsoil.2014.02.001

Chikungunya virus impacts the diversity of symbiotic bacteria in mosquito vector

Autor: Karima, Zouache, Rory J, Michelland, Anna-Bella, Failloux, Genevieve L, Grundmann, Patrick, Mavingui

Publikováno v: Molecular Ecology
Molecular Ecology, Wiley, 2012, 21 (9), pp.2297-2309. 〈10.1111/j.1365-294X.2012.05526.x〉
Molecular Ecology, Wiley, 2012, 21 (9), pp.2297-2309. ⟨10.1111/j.1365-294X.2012.05526.x⟩
Molecular Ecology, 2012, 21 (9), pp.2297-2309. ⟨10.1111/j.1365-294X.2012.05526.x⟩

International audience; Mosquitoes transmit numerous arboviruses including dengue and chikungunya virus (CHIKV). In recent years, mosquito species Aedes albopictus has expanded in the Indian Ocean region and was the principal vector of chikungunya ou

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::b586a288e1de45fb104bdad45053e8bf
https://hal-pasteur.archives-ouvertes.fr/pasteur-01681000

Evolutive history of Poaceae and relationship with bacterial community in the rhizosphere

Autor: Bouffaud, Marie-Lara

Publikováno v: Sciences agricoles. Université Claude Bernard-Lyon I, 2011. Français. ⟨NNT : 2011LYO10341⟩
Sciences agricoles. Université Claude Bernard-Lyon I, 2011. Français. 〈NNT : 2011LYO10341〉

Since the emergence of life on earth, the selection pressures related to biotic and abiotic interactions generated a high diversity of life forms. Thus, each eukaryotic species co-evolved with its associated microbial community. In the case of plants

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::8b31c0b42a21341127a338a8a802b56e
https://tel.archives-ouvertes.fr/tel-01002644/document

Human Pathogens Abundant in the Bacterial Metagenome of Cigarettes

Autor: Timothy M. Vogel, Amy R. Sapkota, Sibel Berger

Publikováno v: Environmental Health Perspectives
Environmental Health Perspectives, National Institute of Environmental Health Sciences, 2010, 118 (3), pp.351-356. ⟨10.1289/ehp.0901201⟩

International audience; BACKGROUND: Many studies have evaluated chemical, heavy metal, and other abiotic substances present in cigarettes and their roles in the development of lung cancer and other diseases, yet no studies have comprehensively evalua

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::765b2b6f8705393bcac2ea5fafc127df
https://hal.archives-ouvertes.fr/hal-00476194