Time Series Data Provide Insights into the Evolution and Abundance of One of the Most Abundant Viruses in the Marine Virosphere: The Uncultured Pelagiphages vSAG 37-F6

Autor: Marina Vila-Nistal, Ramiro Logares, Josep M. Gasol, Manuel Martinez-Garcia

Publikováno v: Viruses, Vol 16, Iss 11, p 1669 (2024)

Viruses play a pivotal role in ecosystems by influencing biochemical cycles and impacting the structure and evolution of their host cells. The widespread pelagiphages infect Pelagibacter spp., the most abundant marine microbe on Earth, and thus play

Externí odkaz: https://doaj.org/article/3211d96369004c56a4731a975505e9a7

Into the Dark: Exploring the Deep Ocean with Single-Virus Genomics

Autor: Francisco Martinez-Hernandez, Oscar Fornas, Manuel Martinez-Garcia

Publikováno v: Viruses, Vol 14, Iss 7, p 1589 (2022)

Single-virus genomics (SVGs) has been successfully applied to ocean surface samples allowing the discovery of widespread dominant viruses overlooked for years by metagenomics, such as the uncultured virus vSAG 37-F6 infecting the ubiquitous Pelagibac

Externí odkaz: https://doaj.org/article/e988a5be22cf4e13920c50433223a204

Droplet Digital PCR for Estimating Absolute Abundances of Widespread Pelagibacter Viruses

Autor: Francisco Martinez-Hernandez, Inmaculada Garcia-Heredia, Monica Lluesma Gomez, Lucia Maestre-Carballa, Joaquín Martínez Martínez, Manuel Martinez-Garcia

Publikováno v: Frontiers in Microbiology, Vol 10 (2019)

Absolute abundances of prokaryotes are typically determined by FISH. Due to the lack of a universal conserved gene among all viruses, metagenomic fragment recruitment is commonly used to estimate the relative viral abundance. However, the paucity of

Externí odkaz: https://doaj.org/article/cf940396da3a4331a02c647c23153ac9

Deciphering the Human Virome with Single-Virus Genomics and Metagenomics

Autor: Maria José de la Cruz Peña, Francisco Martinez-Hernandez, Inmaculada Garcia-Heredia, Mónica Lluesma Gomez, Òscar Fornas, Manuel Martinez-Garcia

Publikováno v: Viruses, Vol 10, Iss 3, p 113 (2018)

Single-cell genomics has unveiled the metabolic potential of dominant microbes inhabiting different environments, including the human body. The lack of genomic information for predominant microbes of the human body, such as bacteriophages, hinders ou

Externí odkaz: https://doaj.org/article/3b3e337da0e5497fb4de2b88f005e525

Droplet Digital PCR for Estimating Absolute Abundances of Widespread Pelagibacter Viruses

Autor: Monica Lluesma Gomez, Inmaculada Garcia-Heredia, Joaquín Martínez Martínez, Lucia Maestre-Carballa, Francisco Martinez-Hernandez, Manuel Martinez-Garcia

Publikováno v: Frontiers in Microbiology
Frontiers in Microbiology, Vol 10 (2019)
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)

Absolute abundances of prokaryotes are typically determined by FISH. Due to the lack of a universal conserved gene among all viruses, metagenomic fragment recruitment is commonly used to estimate the relative viral abundance. However, the paucity of

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2a6cc5e101255a580505e2738e631769
https://hdl.handle.net/10045/92869