Freshwater monitoring by nanopore sequencing

Autor: Lara Urban, Andre Holzer, J Jotautas Baronas, Michael B Hall, Philipp Braeuninger-Weimer, Michael J Scherm, Daniel J Kunz, Surangi N Perera, Daniel E Martin-Herranz, Edward T Tipper, Susannah J Salter, Maximilian R Stammnitz

Publikováno v: eLife, Vol 10 (2021)

While traditional microbiological freshwater tests focus on the detection of specific bacterial indicator species, including pathogens, direct tracing of all aquatic DNA through metagenomics poses a profound alternative. Yet, in situ metagenomic wate

Externí odkaz: https://doaj.org/article/a5cdef33d3f84e9d9243d7fba7dc42b4

Freshwater monitoring by nanopore sequencing

Autor: Urban, Lara, Holzer, Andre, Baronas, J Jotautas, Hall, Michael B, Braeuninger-Weimer, Philipp, Scherm, Michael J, Kunz, Daniel J, Perera, Surangi N, Martin-Herranz, Daniel E, Tipper, Edward T, Salter, Susannah J, Stammnitz, Maximilian R

While traditional microbiological freshwater tests focus on the detection of specific bacterial indicator species, including pathogens, direct tracing of all aquatic DNA through metagenomics poses a profound alternative. Yet, in situ metagenomic wate

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::60426d60f6feda007ad5ee81ea3dd3c1

Freshwater monitoring by nanopore sequencing.

Autor: Urban L; European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, United Kingdom., Holzer A; Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom., Baronas JJ; Department of Earth Sciences, University of Cambridge, Cambridge, United Kingdom., Hall MB; European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, United Kingdom., Braeuninger-Weimer P; Department of Engineering, University of Cambridge, Cambridge, United Kingdom., Scherm MJ; Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom., Kunz DJ; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.; Department of Physics, University of Cambridge, Cambridge, United Kingdom., Perera SN; Department of Physiology, Development & Neuroscience, University of Cambridge, Cambridge, United Kingdom., Martin-Herranz DE; European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, United Kingdom., Tipper ET; Department of Earth Sciences, University of Cambridge, Cambridge, United Kingdom., Salter SJ; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom., Stammnitz MR; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.

Publikováno v: ELife [Elife] 2021 Jan 19; Vol. 10. Date of Electronic Publication: 2021 Jan 19.