Zobrazeno 1 - 10
of 9 119
pro vyhledávání: '"molecular networks"'
This review examines current and potential applications of DTs in healthcare, focusing on the integration of multi-omics data using multilayer network approaches in cancer research. We discuss methodologies, tools and platforms commonly used for this
Externí odkaz:
http://arxiv.org/abs/2410.07252
Asynchronous Boolean networks are a type of discrete dynamical system in which each variable can take one of two states, and a single variable state is updated in each time step according to pre-selected rules. Boolean networks are popular in systems
Externí odkaz:
http://arxiv.org/abs/2410.03976
In this study, the predominant lactic acid bacteria (LAB) isolates were obtained from Gouda, Jack, Cheddar, and Parmesan cheeses produced in Uganda. The isolates were identified through Gram staining, catalase and oxidase tests, and 16S rDNA sequenci
Externí odkaz:
http://arxiv.org/abs/2410.02463
Autor:
Piho, Paul, Thomas, Philipp
Agent-based models capture heterogeneity among individuals in a population and are widely used in studies of multi-cellular systems, disease, epidemics and demography to name a few. However, existing frameworks consider discrete time-step simulation
Externí odkaz:
http://arxiv.org/abs/2409.19294
Autor:
Ramos, Rodrigo Henrique, Bardelotte, Yago Augusto, Ferreira, Cynthia de Oliveira Lage, Simao, Adenilso
Identifying driver genes is crucial for understanding oncogenesis and developing targeted cancer therapies. Driver discovery methods using protein or pathway networks rely on traditional network science measures, focusing on nodes, edges, or communit
Externí odkaz:
http://arxiv.org/abs/2409.19115
Motivation Network visualization is critical for effective communication in various fields of knowledge. Currently, a gap separates network manipulation from network visualization in programming environments. Users often export network data to be lai
Externí odkaz:
http://arxiv.org/abs/2409.18280
Controlling the stochastic dynamics of biological populations is a challenge that arises across various biological contexts. However, these dynamics are inherently nonlinear and involve a discrete state space, i.e., the number of molecules, cells, or
Externí odkaz:
http://arxiv.org/abs/2409.17488
Autor:
Kell, Brayden, Hilfinger, Andreas
Stochastic fluctuations of molecular abundances are a ubiquitous feature of biochemical processes and lead to significant cell-to-cell variability even in clonal populations under identical conditions. Despite the complexity of biochemical control ne
Externí odkaz:
http://arxiv.org/abs/2409.17447
Autor:
Borrelli, Dario
This Letter introduces a generalization of known duplication-divergence models for growing random graphs. This general duplication-divergence model includes a new coupled divergence asymmetry rate, which allows to obtain the structure of random growi
Externí odkaz:
http://arxiv.org/abs/2409.16943
Autor:
Liu, Xiaoyi, Yang, Hongpeng, Ai, Chengwei, Dong, Ruihan, Ding, Yijie, Yuan, Qianqian, Tang, Jijun, Guo, Fei
Incomplete knowledge of metabolic processes hinders the accuracy of GEnome-scale Metabolic models (GEMs), which in turn impedes advancements in systems biology and metabolic engineering. Existing gap-filling methods typically rely on phenotypic data
Externí odkaz:
http://arxiv.org/abs/2409.13259