Zobrazeno 1 - 10
of 555
pro vyhledávání: '"homology search"'
Autor:
Matthias van den Belt, Cameron Gilchrist, Thomas J. Booth, Yit-Heng Chooi, Marnix H. Medema, Mohammad Alanjary
Publikováno v:
BMC Bioinformatics, Vol 24, Iss 1, Pp 1-8 (2023)
Abstract Background Co-localized sets of genes that encode specialized functions are common across microbial genomes and occur in genomes of larger eukaryotes as well. Important examples include Biosynthetic Gene Clusters (BGCs) that produce speciali
Externí odkaz:
https://doaj.org/article/ce3ee01c945f4592902421521f44c479
Publikováno v:
Frontiers in Bioinformatics, Vol 2 (2022)
Since 1992, all state-of-the-art methods for fast and sensitive identification of evolutionary, structural, and functional relations between proteins (also referred to as “homology detection”) use sequences and sequence-profiles (PSSMs). Protein
Externí odkaz:
https://doaj.org/article/ffad0397dd8d402ea06aee96cf68be6f
Akademický článek
Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.
K zobrazení výsledku je třeba se přihlásit.
Autor:
Mindaugas Margelevičius
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-13 (2019)
Abstract Background Alignment of sequence families described by profiles provides a sensitive means for establishing homology between proteins and is important in protein evolutionary, structural, and functional studies. In the context of a steadily
Externí odkaz:
https://doaj.org/article/b80f9e6f6fd74e79afd60786b0278d1c
Publikováno v:
Frontiers in Genetics, Vol 12 (2021)
Noncoding RNAs (ncRNAs) play important regulatory and functional roles in microorganisms, such as regulation of gene expression, signaling, protein synthesis, and RNA processing. Hence, their classification and quantification are central tasks toward
Externí odkaz:
https://doaj.org/article/28b671bb14a9460b99dd087041ba89c8
Akademický článek
Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.
K zobrazení výsledku je třeba se přihlásit.
Publikováno v:
BMC Bioinformatics, Vol 18, Iss S12, Pp 77-89 (2017)
Abstract Background Homology search is still a significant step in functional analysis for genomic data. Profile Hidden Markov Model-based homology search has been widely used in protein domain analysis in many different species. In particular, with
Externí odkaz:
https://doaj.org/article/a98663b581954e2684375e2e465eec08
Autor:
Alan Medlar, Liisa Holm
Publikováno v:
BMC Bioinformatics, Vol 19, Iss 1, Pp 1-9 (2018)
Abstract Background Protein homology search is an important, yet time-consuming, step in everything from protein annotation to metagenomics. Its application, however, has become increasingly challenging, due to the exponential growth of protein datab
Externí odkaz:
https://doaj.org/article/753ce6bffdd34cb29a978f619185cc65
Autor:
Matthew J Hayes, Vineet Choudhary, Namrata Ojha, John JH Shin, Gil-Soo Han, George M. Carman, Christopher JR Loewen, William A Prinz, Timothy P Levine
Publikováno v:
Microbial Cell, Vol 5, Iss 2, Pp 88-103 (2017)
Fat storage-inducing transmembrane (FIT or FITM) proteins have been implicated in the partitioning of triacylglycerol to lipid droplets and the budding of lipid droplets from the ER. At the molecular level, the sole relevant interaction is that FITMs
Externí odkaz:
https://doaj.org/article/5c562e39cddf446a865bb58729b27306
Autor:
Dilini A. Samarajeewa, Pennapa Manitchotpisit, Miranda Henderson, Hua Xiao, David G. Rehard, Kevin A. Edwards, Patrick K. T. Shiu, Thomas M. Hammond
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 7, Iss 8, Pp 2871-2882 (2017)
Meiotic silencing by unpaired DNA (MSUD) is a biological process that searches pairs of homologous chromosomes (homologs) for segments of DNA that are unpaired. Genes found within unpaired segments are silenced for the duration of meiosis. In this re
Externí odkaz:
https://doaj.org/article/a1c60befb7e34f40a89808801f3f9c56