tidytof: a user-friendly framework for scalable and reproducible high-dimensional cytometry data analysis.

Autor: Keyes, Timothy J^1,2,3, Koladiya, Abhishek³, Lo, Yu-Chen³, Nolan, Garry P⁴, Davis, Kara L^3,5 kardavis@stanford.edu

Publikováno v: Bioinformatics Advances. 2023, Vol. 3 Issue 1, p1-5. 5p.

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AliGater: a framework for the development of bioinformatic pipelines for large-scale, high-dimensional cytometry data.

Autor: Ekdahl, Ludvig^1,2 ludvig.ekdahl@med.lu.se, Arrizabalaga, Antton Lamarca^1,2, Ali, Zain^1,2, Cafaro, Caterina^1,2, Portilla, Aitzkoa Lopez de Lapuente^1,2, Nilsson, Björn^1,2,3

Publikováno v: Bioinformatics Advances. 2023, Vol. 3 Issue 1, p1-4. 4p.

High-Dimensional Cytometry Dissects Immunological Fingerprints of Idiopathic Inflammatory Myopathies.

Autor: Nelke, Christopher^1,2 (AUTHOR), Pawlitzki, Marc^1,2 (AUTHOR), Schroeter, Christina B.¹ (AUTHOR), Huntemann, Niklas¹ (AUTHOR), Räuber, Saskia¹ (AUTHOR), Dobelmann, Vera¹ (AUTHOR), Preusse, Corinna³ (AUTHOR), Roos, Andreas⁴ (AUTHOR), Allenbach, Yves⁵ (AUTHOR), Benveniste, Olivier⁵ (AUTHOR), Wiendl, Heinz² (AUTHOR), Lundberg, Ingrid E.⁶ (AUTHOR), Stenzel, Werner³ (AUTHOR), Meuth, Sven G.¹ (AUTHOR), Ruck, Tobias¹ (AUTHOR) tobias.ruck@med.uni-duesseldorf.de

Publikováno v: Cells (2073-4409). Oct2022, Vol. 11 Issue 20, p3330-N.PAG. 17p.

MetaGate: Interactive Analysis of High-Dimensional Cytometry Data with Meta Data Integration.

Autor: Ask EH; Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.; The Precision Immunotherapy Alliance, University of Oslo, Oslo, Norway., Tschan-Plessl A; Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.; Division of Hematology, University Hospital Basel, Basel, Switzerland., Hoel HJ; Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway., Kolstad A; Department of Oncology, Innlandet Hospital Trust Division Gjøvik, Lillehammer, Norway., Holte H; Department of Oncology, Oslo University Hospital, Oslo, Norway.; K.G. Jebsen Centre for B cell malignancies, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Oslo, Norway., Malmberg KJ; Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.; The Precision Immunotherapy Alliance, University of Oslo, Oslo, Norway.; Center for Infectious Medicine, Department of Medicine Huddinge, Karolinska Institutet, Stockholm, Sweden.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2023 Nov 01. Date of Electronic Publication: 2023 Nov 01.