Zobrazeno 1 - 10
of 4 148
pro vyhledávání: '"hi-c"'
Autor:
Xiaoyan Zhu, Yi Yang, Qiuyao Li, Jing Li, Lin Du, Yanhan Zhou, Hongbo Jin, Liwen Song, Qi Chen, Bingzhong Ren
Publikováno v:
BMC Biology, Vol 22, Iss 1, Pp 1-17 (2024)
Abstract Background Baryscapus dioryctriae (Chalcidodea: Eulophidae) is a parasitic wasp that parasitizes the pupae of many Pyralidae members and has been used as a biological control agent against Dioryctria pests of pinecones. Results This B. diory
Externí odkaz:
https://doaj.org/article/9162ed31082f404592ef3db220304376
Publikováno v:
BMC Bioinformatics, Vol 25, Iss 1, Pp 1-15 (2024)
Abstract Background Chromosome organization plays an important role in biological processes such as replication, regulation, and transcription. One way to study the relationship between chromosome structure and its biological functions is through Hi-
Externí odkaz:
https://doaj.org/article/b20881c1c94c4b09a32b7406e4c0ff5f
Autor:
Sean M. Flynn, Somdutta Dhir, Krzysztof Herka, Colm Doyle, Larry Melidis, Angela Simeone, Winnie W. I. Hui, Rafael de Cesaris Araujo Tavares, Stefan Schoenfelder, David Tannahill, Shankar Balasubramanian
Publikováno v:
Genome Biology, Vol 25, Iss 1, Pp 1-10 (2024)
Abstract Methods to measure chromatin contacts at genomic regions bound by histone modifications or proteins are important tools to investigate chromatin organization. However, such methods do not capture the possible involvement of other epigenomic
Externí odkaz:
https://doaj.org/article/64f8f18f52c349d5bcf820beb8d79a27
Publikováno v:
Microbiome, Vol 12, Iss 1, Pp 1-17 (2024)
Abstract Background Understanding the interactions and dynamics of microbiotas within biological wastewater treatment systems is essential for ensuring their stability and long-term sustainability. In this study, we developed a systematic framework e
Externí odkaz:
https://doaj.org/article/e2cdf907a30d4fa8b89d44979c20c6c2
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 23, Iss , Pp 1584-1593 (2024)
For many years, multi-scale models of chromatin domains, such as A/B compartments, sub-compartments, topologically associated domains (TADs), sub-TADs, and loops have been popular. However, existing methods can only identify structures at a single sc
Externí odkaz:
https://doaj.org/article/44e309a698a84d3abd66c2f8e1981d7f
Autor:
Hang Yan, Yunhao Zhu, Haoyu Jia, Yuanjun Li, Yongguang Han, Xiaoke Zheng, Xiule Yue, Le Zhao, Weisheng Feng
Publikováno v:
BMC Genomic Data, Vol 25, Iss 1, Pp 1-4 (2024)
Abstract Objectives As a traditional Chinese medicine, Lepidium apetalum is commonly used for purging the lung, relieving dyspnea, alleviating edema, and has the significant pharmacological effects on cardiovascular disease, hyperlipidemia, etc. In a
Externí odkaz:
https://doaj.org/article/86ccd160a85b4bc99c459e413bcfdb14
Publikováno v:
Epigenetics & Chromatin, Vol 17, Iss 1, Pp 1-12 (2024)
Abstract The three-dimensional organization of the genome plays a central role in the regulation of cellular functions, particularly in the human brain. This review explores the intricacies of chromatin organization, highlighting the distinct structu
Externí odkaz:
https://doaj.org/article/5898711ce02645a5b39091d59aadc86a
Autor:
Eva D’haene, Víctor López-Soriano, Pedro Manuel Martínez-García, Soraya Kalayanamontri, Alfredo Dueñas Rey, Ana Sousa-Ortega, Silvia Naranjo, Stijn Van de Sompele, Lies Vantomme, Quinten Mahieu, Sarah Vergult, Ana Neto, José Luis Gómez-Skarmeta, Juan Ramón Martínez-Morales, Miriam Bauwens, Juan Jesús Tena, Elfride De Baere
Publikováno v:
Genome Biology, Vol 25, Iss 1, Pp 1-24 (2024)
Abstract Background Vision depends on the interplay between photoreceptor cells of the neural retina and the underlying retinal pigment epithelium (RPE). Most genes involved in inherited retinal diseases display specific spatiotemporal expression wit
Externí odkaz:
https://doaj.org/article/a3d8d2ce3b6a449b865a48720cdd33d6
Autor:
S. Brooks Parrish, Zhanao Deng
Publikováno v:
Horticulture Advances, Vol 2, Iss 1, Pp 1-13 (2024)
Abstract This study presents the first annotated, haplotype-resolved, chromosome-scale genome of Lantana camara, a flowering shrub native to Central America and known for its dual role as an ornamental plant and an invasive species. Despite its wides
Externí odkaz:
https://doaj.org/article/ab3f5715c9e74af3aeb87e4f1201ee82
Publikováno v:
Epigenetics & Chromatin, Vol 17, Iss 1, Pp 1-26 (2024)
Abstract Background Nuclear organization of interphase chromosomes involves individual chromosome territories, “open” and “closed” chromatin compartments, topologically associated domains (TADs) and chromatin loops. The DNA- and RNA-binding t
Externí odkaz:
https://doaj.org/article/4e3f3cede6224dab86f82a3f9d3a5aaa