Uncoupled: investigating the lack of correlation between the transcription of putative plastic-degrading genes in the global ocean microbiome and marine plastic pollution

Autor: Victor Gambarini, Cornelis J. Drost, Joanne M. Kingsbury, Louise Weaver, Olga Pantos, Kim M. Handley, Gavin Lear

Publikováno v: Environmental Microbiome, Vol 19, Iss 1, Pp 1-13 (2024)

Abstract Background Plastic pollution is a severe threat to marine ecosystems. While some microbial enzymes can degrade certain plastics, the ability of the global ocean microbiome to break down diverse environmental plastics remains limited. We empl

Externí odkaz: https://doaj.org/article/27e1c25f74e141afadc9dcacb7551090

The Landscape of Global Ocean Microbiome: From Bacterioplankton to Biofilms

Autor: Jie Lu, Yi Shu, Heng Zhang, Shangxian Zhang, Chengrui Zhu, Wei Ding, Weipeng Zhang

Publikováno v: International Journal of Molecular Sciences, Vol 24, Iss 7, p 6491 (2023)

The development of metagenomics has opened up a new era in the study of marine microbiota, which play important roles in biogeochemical cycles. In recent years, the global ocean sampling expeditions have spurred this research field toward a deeper un

Externí odkaz: https://doaj.org/article/a6e751b589784846aad87c8459ea7541

Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.

Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Autor: Salazar Guiral, Guillem, Paoli, Lucas, Alberti, Adriana, Huerta-Cepas, Jaime, Ruscheweyh, Hans-Joachim, Cuenca Vera, Miguelangel, Field, Christopher, Coelho, Luis Pedro, Cruaud, Corinne, Engelen, Stefan, Gregory, Ann C., Labadie, Karine, Marec, Claudie, Pelletier, Eric, Royo-Llonch, Marta, Roux, Simon, Sánchez, Pablo, Uehara, Hideya, Zayed, Ahmed A., Zeller, Georg, Carmichael, Margaux, Dimier, Céline, Ferland, Joannie, Kandels, Stefanie, Picheral, Marc, Pisarev, Sergey, Poulain, Julie, Tara Oceans Coordinators, Wincker, Patrick, Acinas, Silvia G., Babin, Marcel, Bork, Peer, Boss, Emmanuel, Bowler, Chris, Cochrane, Guy R., de Vargas, Colomban, Follows, Michael J., Gorsky, Gabriel, Grimsley, Nigel, Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Jaillon, Olivier, Kandels-Lewis, Stefanie, Karp-Boss, Lee, Karsenti, Eric, Not, Fabrice, Ogata, Hiroyuki, Pesant, Stéphane, Poulton, Nicole, Raes, Jeroen, Sardet, Christian, Speich, Sabrina, Stemmann, Lars, Sullivan, Matthew, Sunagawa, Shinichi

Publikováno v: Cell, 179 (5)

Ocean microbial communities strongly influence the biogeochemistry, food webs, and climate of our planet. Despite recent advances in understanding their taxonomic and genomic compositions, little is known about how their transcriptomes vary globally.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f524d2eb4370f4453d7bc667b7a6631
https://hdl.handle.net/20.500.11850/379269

Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Autor: Guillem Salazar, Lucas Paoli, Adriana Alberti, Jaime Huerta-Cepas, Hans-Joachim Ruscheweyh, Miguelangel Cuenca, Christopher M. Field, Luis Pedro Coelho, Corinne Cruaud, Stefan Engelen, Ann C. Gregory, Karine Labadie, Claudie Marec, Eric Pelletier, Marta Royo-Llonch, Simon Roux, Pablo Sánchez, Hideya Uehara, Ahmed A. Zayed, Georg Zeller, Margaux Carmichael, Céline Dimier, Joannie Ferland, Stefanie Kandels, Marc Picheral, Sergey Pisarev, Julie Poulain, Silvia G. Acinas, Marcel Babin, Peer Bork, Chris Bowler, Colomban de Vargas, Lionel Guidi, Pascal Hingamp, Daniele Iudicone, Lee Karp-Boss, Eric Karsenti, Hiroyuki Ogata, Stephane Pesant, Sabrina Speich, Matthew B. Sullivan, Patrick Wincker, Shinichi Sunagawa, Emmanuel Boss, Guy Cochrane, Michael Follows, Gabriel Gorsky, Nigel Grimsley, Olivier Jaillon, Stefanie Kandels-Lewis, Fabrice Not, Nicole Poulton, Jeroen Raes, Christian Sardet, Lars Stemmann

Publikováno v: Cell
Cell, Elsevier, 2019, 179 (5), pp.1068-1083.e21. ⟨10.1016/j.cell.2019.10.014⟩
Cell, 2019, 179 (5), pp.1068-1083.e21. ⟨10.1016/j.cell.2019.10.014⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Cell (0092-8674) (Elsevier BV), 2019-11, Vol. 179, N. 5, P. 1068-1083.e21 (38p.)

This article is contribution number 94 of Tara Oceans.-- 37 pages, 20 figures, 1 table, supplementary information https://doi.org/10.1016/j.cell.2019.10.014.-- All raw reads are available through ENA at https://www.ebi.ac.uk/ena using the identifiers

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3089288db36746894b7a45f369b6fe8e