Zobrazeno 1 - 10
of 77
pro vyhledávání: '"genome visualization"'
Publikováno v:
mSystems, Vol 9, Iss 7 (2024)
ABSTRACT The analysis and comparison of genomes rely on different tools for tasks such as annotation, orthology prediction, and phylogenetic inference. Most tools are specialized for a single task, and additional efforts are necessary to integrate
Externí odkaz:
https://doaj.org/article/e35d3637ee894817a8f7b68a7ed882cd
Publikováno v:
BMC Bioinformatics, Vol 24, Iss 1, Pp 1-33 (2023)
Abstract Background Pan-genome graphs are gaining importance in the field of bioinformatics as data structures to represent and jointly analyze multiple genomes. Compacted de Bruijn graphs are inherently suited for this purpose, as their graph topolo
Externí odkaz:
https://doaj.org/article/608f41265dd34314802e1e271673d7df
Publikováno v:
BMC Bioinformatics, Vol 23, Iss 1, Pp 1-9 (2022)
Abstract Background The recent advancements in high-throughput sequencing have resulted in the availability of annotated genomes, as well as of multi-omics data for many living organisms. This has increased the need for graphic tools that allow the c
Externí odkaz:
https://doaj.org/article/8e724816b8524b56ab7048d72324eb01
Akademický článek
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Akademický článek
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Autor:
Tereza Vychodil, Darren J. Wight, Mariana Nascimento, Fabian Jolmes, Thomas Korte, Andreas Herrmann, Benedikt B. Kaufer
Publikováno v:
Viruses, Vol 14, Iss 2, p 287 (2022)
Visualization of the herpesvirus genomes during lytic replication and latency is mainly achieved by fluorescence in situ hybridization (FISH). Unfortunately, this technique cannot be used for the real-time detection of viral genome in living cells. T
Externí odkaz:
https://doaj.org/article/f6cce41f07314b98ab7abeb6396b5b94
Autor:
Yongbing Zhao, Chen Sun, Dongyu Zhao, Yadong Zhang, Yang You, Xinmiao Jia, Junhui Yang, Lingping Wang, Jinyue Wang, Haohuan Fu, Yu Kang, Fei Chen, Jun Yu, Jiayan Wu, Jingfa Xiao
Publikováno v:
BMC Genomics, Vol 19, Iss S1, Pp 115-124 (2018)
Abstract Background Since PGAP (pan-genome analysis pipeline) was published in 2012, it has been widely employed in bacterial genomics research. Though PGAP has integrated several modules for pan-genomics analysis, how to properly and effectively int
Externí odkaz:
https://doaj.org/article/778dfe46a6174e30abed0aee35dafbc8
Akademický článek
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Autor:
Jacqueline Batley, David Edwards
Publikováno v:
BioTechniques, Vol 46, Iss 5, Pp 333-336 (2009)
Over the last few years there has been a revolution in DNA sequencing technology that has brought down the cost of DNA sequencing and made the sequencing of an increasing number of genomes both feasible and cost effective. There has also been a drama
Externí odkaz:
https://doaj.org/article/9bb0104f863647c3a900b55b6f968302
Autor:
Kaufer, Tereza Vychodil, Darren J. Wight, Mariana Nascimento, Fabian Jolmes, Thomas Korte, Andreas Herrmann, Benedikt B.
Publikováno v:
Viruses; Volume 14; Issue 2; Pages: 287
Visualization of the herpesvirus genomes during lytic replication and latency is mainly achieved by fluorescence in situ hybridization (FISH). Unfortunately, this technique cannot be used for the real-time detection of viral genome in living cells. T
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=multidiscipl::6dad87b879dc0117198e713cd8f49350