Zobrazeno 1 - 10
of 561
pro vyhledávání: '"de novo genome assembly"'
Publikováno v:
BMC Plant Biology, Vol 24, Iss 1, Pp 1-17 (2024)
Abstract Background Diviner’s sage (Salvia divinorum; Lamiaceae) is the source of the powerful hallucinogen salvinorin A (SalA). This neoclerodane diterpenoid is an agonist of the human Κ-opioid receptor with potential medical applications in the
Externí odkaz:
https://doaj.org/article/acef4c1fb64d41e6b9f03b7720e66129
Publikováno v:
Frontiers in Bioinformatics, Vol 4 (2024)
The implementation of Hi-C reads in the de novo genome assembly process allows the ordering of large regions of the genome in scaffolds and the generation of chromosome-level assemblies. Several bioinformatics tools have been developed for genome sca
Externí odkaz:
https://doaj.org/article/5b6e0caaa16447d2bcd45db834f6f475
Autor:
Sang-Eun Nam, Jae-Sung Rhee
Publikováno v:
Data in Brief, Vol 55, Iss , Pp 110596- (2024)
The pale chub, Zacco platypus (Cypriniformes; Xenocyprididae; homotypic synonym: Opsariichthys platypus; Jordan & Evermann, 1902), is widely distributed in the freshwater ecosystems throughout East Asia, including South Korea. In this study, we const
Externí odkaz:
https://doaj.org/article/182c8678390d4c5a9b2d3fb191a9126b
Autor:
Tom Pennance, Javier Calvelo, Jacob A. Tennessen, Ryan Burd, Jared Cayton, Stephanie R. Bollmann, Michael S. Blouin, Johannie M. Spaan, Federico G. Hoffmann, George Ogara, Fredrick Rawago, Kennedy Andiego, Boaz Mulonga, Meredith Odhiambo, Eric S. Loker, Martina R. Laidemitt, Lijun Lu, Andrés Iriarte, Maurice R. Odiere, Michelle L. Steinauer
Publikováno v:
BMC Genomics, Vol 25, Iss 1, Pp 1-28 (2024)
Abstract Background Control and elimination of schistosomiasis is an arduous task, with current strategies proving inadequate to break transmission. Exploration of genetic approaches to interrupt Schistosoma mansoni transmission, the causative agent
Externí odkaz:
https://doaj.org/article/060b7a186267402a98b79932cf522cff
Autor:
Benjamin D. Young, Olivia M. Williamson, Nicholas S. Kron, Natalia Andrade Rodriguez, Lys M. Isma, Nicholas J. MacKnight, Erinn M. Muller, Stephanie M. Rosales, Stephanie M. Sirotzke, Nikki Traylor-Knowles, Sara D. Williams, Michael S. Studivan
Publikováno v:
BMC Genomics, Vol 25, Iss 1, Pp 1-12 (2024)
Abstract Long-read sequencing is revolutionizing de-novo genome assemblies, with continued advancements making it more readily available for previously understudied, non-model organisms. Stony corals are one such example, with long-read de-novo genom
Externí odkaz:
https://doaj.org/article/a01e8cb9048b4f3fade0a09b4de212cf
Publikováno v:
Diversity, Vol 16, Iss 9, p 529 (2024)
The pale chub Zacco platypus (Cypriniformes; Xenocyprididae; Jordan & Evermann, 1902) is widely distributed across freshwater ecosystems in East Asia and has been recognized as a potential model fish species for ecotoxicology and environmental monito
Externí odkaz:
https://doaj.org/article/96767c0aa3004862aa18b87a24303f82
Autor:
Sandra Triebel, Konrad Sachse, Michael Weber, Martin Heller, Celia Diezel, Martin Hölzer, Christiane Schnee, Manja Marz
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-14 (2023)
Abstract Mycoplasmopsis (M.) bovis, the agent of mastitis, pneumonia, and arthritis in cattle, harbors a small genome of approximately 1 Mbp. Combining data from Illumina and Nanopore technologies, we sequenced and assembled the genomes of 35 Europea
Externí odkaz:
https://doaj.org/article/e4c5e052a0ef4df4a95d55721eac214d
Publikováno v:
Genomics, Proteomics & Bioinformatics, Vol 21, Iss 3, Pp 501-514 (2023)
The white-blotched river stingray (Potamotrygon leopoldi) is a cartilaginous fish native to the Xingu River, a tributary of the Amazon River system. As a rare freshwater-dwelling cartilaginous fish in the Potamotrygonidae family in which no member ha
Externí odkaz:
https://doaj.org/article/eee80ae868f0437191a2e130ba135db1
Autor:
Ekaterina M. Dvorianinova, Elena N. Pushkova, Nadezhda L. Bolsheva, Elena V. Borkhert, Tatiana A. Rozhmina, Daiana A. Zhernova, Roman O. Novakovskiy, Anastasia A. Turba, Elizaveta A. Sigova, Nataliya V. Melnikova, Alexey A. Dmitriev
Publikováno v:
Frontiers in Genetics, Vol 14 (2023)
Sequencing whole plant genomes provides a solid foundation for applied and basic studies. Genome sequences of agricultural plants attract special attention, as they reveal information on the regulation of beneficial plant traits. Flax is a valuable c
Externí odkaz:
https://doaj.org/article/47d2712536b642bea562b1d5ac5920ad
Autor:
Adrián Muñoz-Barrera, Laura Ciuffreda, Julia Alcoba-Florez, Luis A. Rubio-Rodríguez, Héctor Rodríguez-Pérez, Helena Gil-Campesino, Diego García-Martínez de Artola, Josmar Salas-Hernández, Julia Rodríguez-Núñez, Antonio Íñigo-Campos, Víctor García-Olivares, Oscar Díez-Gil, Rafaela González-Montelongo, Agustín Valenzuela-Fernández, José M. Lorenzo-Salazar, Carlos Flores
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 21, Iss , Pp 2197-2203 (2023)
On July 23, 2022, monkeypox disease (mpox) was declared a Public Emergency of International Concern (PHEIC) by the World Health Organization (WHO) due to a multicountry outbreak. In Europe, several cases of mpox virus (MPXV) infection related to this
Externí odkaz:
https://doaj.org/article/51086f1e709c4d128c66965fc267d64c