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España y la Paz de Ryswick : De la Paz de Nimega (1678) a la de Ryswick (1697)

Autor: de Haro, Antonio Serrano, author¹

Publikováno v: España y Holanda: Ponencias presentadas durante el Quinto Coloquio Hispanoholandés de Historiadores celebrado en la Universidad de Leiden del 17 al 20 de noviembre de 1993. :119-138

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Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

Autor: Sanchez Herrero, Jose Francisco, Pluvinet, Raquel, Luna de Haro, Antonio, Sumoy, Lauro

Publikováno v: BMC Bioinformatics
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-16 (2021)

Background Next generation sequencing has allowed the discovery of miRNA isoforms, termed isomiRs. Some isomiRs are derived from imprecise processing of pre-miRNA precursors, leading to length variants. Additional variability is introduced by non-tem

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::db2d977d0d43bf03356be05ab591c3b6
https://doi.org/10.1186/s12859-021-04128-1

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Additional file 4 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

Autor: Herrero, Jose Francisco Sanchez, Pluvinet, Raquel, De Haro, Antonio Luna, Sumoy, Lauro

Additional file 4: Figure S3 A: Classification and comparison of miRTOP sequences from simulations results using miraligner software, for each isomiR class and each category of analysis: PE_0 (PE analysis, parameter fastq-join 0% percentage differenc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b59d62162d1e823bb11fb218748ffd53

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Additional file 6 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

Autor: Herrero, Jose Francisco Sanchez, Pluvinet, Raquel, De Haro, Antonio Luna, Sumoy, Lauro

Additional file 6: Figure S4: Venn diagrams of the overlapping isomiRs identified for each category of analysis and subclassified for each isomiR type category: A) canonical; B) iso_3p; C) iso_5p; D) iso_add3p; E) iso_snv; F) iso_snv_central; G) iso_

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Additional file 1 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

Autor: Herrero, Jose Francisco Sanchez, Pluvinet, Raquel, De Haro, Antonio Luna, Sumoy, Lauro

Additional file 1: Figure S1: Schematic summarizing the biogenesis of miRNA and isomiRs (Adapted from figure 1 in [45] with permission of the Association for Research in Vision and Ophthalmology, the copyright holder, and freely accessible Wikipedia

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Additional file 8 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

Autor: Herrero, Jose Francisco Sanchez, Pluvinet, Raquel, De Haro, Antonio Luna, Sumoy, Lauro

Additional file 8: Figure S6 A: Classification and comparison of miRTOP sequences from GEO project GSE114923 using miraligner software, for each isomiR class and each category of analysis: PE_0 (PE analysis, parameter fastq-join 0% percentage differe

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b5a844c103dcd21f7d565fdde064cf8

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Additional file 3 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

Autor: Herrero, Jose Francisco Sanchez, Pluvinet, Raquel, De Haro, Antonio Luna, Sumoy, Lauro

Additional file 3: Figure S2 B: Simulation statistics for three different softwares, from left to right (miraligner, OPTIMIR and sRNAbench) and in colors for different read types: red, Paired-end (PE); green, Single-end R1 (R1) and blue, SE R2 (R2).

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